|   |
2 | . | . | . | . | . | . | . | 10 | |
|
. | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | |
|
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|
. | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | |
|
|
|
|
|
|
. | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|  | . | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  | . | . | . | . | . |
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
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|
|
|
| . |
. |
. |
. |
. |
|
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|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
Query Sequence |   |
I | A | I | T | G | A | T | G | Q | . |
. |
L | G | H | Y | V | I | E | S | L | M | K | T | V | P | A | S | Q | I | V | A | I | V | R | N | P | A | K | A | Q | A | L | A | A | . |
. |
. |
. |
. |
Q | G | I | T | V | R | Q | A | D | Y | G | D | E | A | A | L | T | S | A | L | Q | . |
. |
. |
. |
. |
. |
. |
G | V | E |
Query Conservation |   |
|
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|   | . | . |
|
|   |   |
|
|   |   |
|
|   |   |   |   |
|   |   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   | . | . | . | . | . |   |   |
|   |   |
|   |   |
|   |   |
|   |   |   |   |   |   |
|   |   | . | . | . | . | . | . | . |   |   |   |
Alig confidence |   |
|
|
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|
| . | . |
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|
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|
| . | . |
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| . | . | . | . | . |
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|
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|
|
| . | . | . | . | . | . | . |
|
|
|
Template Conservation |   |
|
|
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|
|   |   |
|
|
|   |
|
|
|   |   |
|
|   |   | . | . |
|
|   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
G | V | I | I | G | V | A | N | D | K | S | L | A | W | G | I | A | K | A | V | C | A | Q | . |
. |
G | A | E | V | A | L | T | Y | L | S | E | T | F | K | K | R | V | D | P | L | A | E | S | L | G | V | K | L | T | V | P | C | D | V | S | D | A | E | S | V | D | N | M | F | K | V | L | A | E | E | W | G | S | L | D |
Template Known Secondary structure |   |
 |  |  |  |
|
|
| S | S | S | S |  |  |  |  |  |  |  |  |  |  |  | T | . | . | T |
|  |  |  |  |  |  | S |
| G | G | G |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |
|
| T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|
| S |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
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|
|  |  |  |  |
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|  |  |  |  |
|
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|
|
Template SS confidence |   |
|
|
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|
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|
  |   |
12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | |
|
. | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . |
  |
  |   |
68 | . | 70 | . | . | . | . | . | . | . | |
|
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. | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
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|
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|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Sequence |   |
K | L | L | L | I | S | S | S | E | V | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | Q | R | A | P | Q | H | R | N | V | I | N | A | A | K | A | A | G | V | K | F | I | A | Y | T | S | L | L | H | A | D | T | S | P | L | G | L | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
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|
|
|
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|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
  |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |
|
|   |
Template Sequence |   |
F | V | V | H | A | V | A | F | S | D | K | N | E | L | K | G | R | Y | V | D | T | S | L | G | N | F | L | T | S | M | H | I | S | C | Y | S | F | T | Y | I | A | S | K | A | E | P | L | M | T | N | G | G | S | I | L | T | L | S | Y | Y | G | A | E | K | V | V | P | H | Y | N | V | M | G | V | C | K | A | A | L | E |
Template Known Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|  |  |  |  | T | S |
| G | G | G |
|
|  |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  | G | G | G |
| T | T |
|  |  |  |  |  |  |  |
| G | G | G | T | S |
|
| T | T | T |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
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|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
  |   |
90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . |
  |
  |   |
116 | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | |
|
. | . | . | . | . | . | . | 190 | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
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|
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|
|  |  |  |
|
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|  |  |  |
|
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|
|
|  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |
|
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
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|
|
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|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
| . |
. |
|
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|
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|
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|
|
Query Sequence |   |
D | E | H | I | E | T | E | K | M | L | A | D | S | G | I | V | Y | T | L | L | R | N | G | W | Y | S | E | N | Y | L | A | S | A | P | A | A | L | E | H | G | V | F | I | G | A | A | G | D | G | K | I | A | S | A | T | R | A | D | Y | A | A | A | A | A | R | V | I | . |
. |
S | E | A | G | H | E | G | K | V | Y | E |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |   |   |   |   |   | . | . |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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| . | . | . | . | . | . | . | . |
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|
|
| . | . |
|
|
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|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|
|   |
|   |   |   |   |   |
|
|
|
|   |
|   |
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
| . | . | . | . | . | . | . | . |   |
|   |   |   |
|
|
|
|
|   |   |   |   |   |
|   |
|   |   |
|   |   |
|
|
|   |   |
|   |
Template Sequence |   |
A | S | V | K | Y | L | A | V | D | L | G | K | Q | Q | I | R | V | N | A | I | S | A | G | P | V | R | S | D | F | H | Y | I | L | T | W | N | K | Y | N | S | P | L | . |
. |
. |
. |
. |
. |
. |
. |
R | R | N | T | T | L | D | D | V | G | G | A | A | L | Y | L | L | S | D | L | G | R | G | T | T | G | E | T | V | H |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | T | T | T |  |  |  |  |  |  |  |  |
|
| B |
|
|  |  |  |  |  |  |  |  |  |  |  |  | S | T | T | . | . | . | . | . | . | . | . | S | S |
| B |
|  |  |  |  |  |  |  |  |  |  |  |  | S | G | G | G | T | T |
|
| S |
|  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
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|
|  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . |
|
|
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|
|  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |
|
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
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|
|
|
|
|
  |   |
170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | |
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . |
  |
  |   |
194 | . | . | . | . | . | 200 |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
Query Sequence |   |
L | A | G | D | S | A | W |
Query Conservation |   |
  |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|   |
|   |
Template Sequence |   |
V | D | C | G | Y | H | V |
Template Known Secondary structure |   |
 | S | T | T | G | G | G |
Template Predicted Secondary structure |   |
 |
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
  |   |
249 | 250 | . | . | . | . | . |
  |