Job Description P39315 Confidence 99.81% Date Thu Jan 5 11:59:18 GMT 2012 Rank 83 Aligned Residues 192 % Identity 14% Template c3h2sA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:putative nadh-flavin reductase; PDBTitle: crystal structure of the q03b84 protein from lactobacillus2 casei. northeast structural genomics consortium target3 lcr19. Resolution 1.78 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.				.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																				.	.	.
Query SS confidence																																																																				.	.	.
Query Sequence		I	A	I	T	G	A	T	G	Q	L	G	H	Y	V	I	E	S	L	M	K	T	V	P	A	S	Q	I	V	A	I	V	R	N	P	A	K	A	Q	A	L	A	A	Q	G	I	T	V	R	Q	A	D	Y	G	D	E	A	A	L	T	S	A	L	Q	G	V	E	.	.	.	K	L	L	L	I	S	S	S	E	V	G
Query Conservation																																																																				.	.	.
Alig confidence																							.	.																																												.	.	.
Template Conservation																							.	.
Template Sequence		I	A	V	L	G	A	T	G	R	A	G	S	A	I	V	A	E	A	R	R	R	.	.	G	H	E	V	L	A	V	V	R	D	P	Q	K	A	A	D	R	L	G	A	T	V	A	T	L	V	K	E	P	L	V	L	T	E	A	D	L	D	S	V	D	A	V	V	D	A	L	S	V	P	W	G	S	G	R	G	Y
Template Known Secondary structure						T	T	T	S													T	.	.	T								S									T		T	T	S							G	G	G							T	T		S										T	T	S	S		T
Template Predicted Secondary structure																							.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.			.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.																				.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	R	A	P	Q	H	R	N	V	I	N	A	A	K	A	A	G	V	K	F	I	A	Y	T	S	L	L	H	A	D	T	S	P	L	G	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	E	H	I	E	T	E	K	M	L	A	D	S	G	I	V	Y	T	L	L	R	N	G	W
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	H	L	D	F	A	T	H	L	V	S	L	L	R	N	S	D	T	L	A	V	F	I	L	G	S	A	S	L	A	X	P	G	A	D	H	P	X	I	L	D	F	P	E	S	A	A	S	Q	P	W	Y	D	G	A	L	Y	Q	Y	Y	E	Y	Q	F	L	Q	X	N	A	N	V	N	W	I	G	I	S	P	S	E
Template Known Secondary structure													T		T	T											G	G	G	S	B		T	T		S	S		G	G	G	G			G	G	G	G	G	S	T	T															T	T		T	T	S									S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	S	E	N	Y	L	A	S	A	P	A	A	L	E	H	G	V	F	I	G	A	A	G	D	G	K	I	A	S	A	T	R	A	D	Y	A	A	A	A	A	R	V	I	S	E	A	G	H	E	G	K	V	Y	E	L	A	G	D	S
Query Conservation
Alig confidence																									.	.	.
Template Conservation																									.	.	.
Template Sequence		A	F	P	S	G	P	A	T	S	Y	V	A	G	K	D	T	L	L	V	G	E	D	G	.	.	.	Q	S	H	I	T	T	G	N	X	A	L	A	I	L	D	Q	L	E	H	P	T	A	I	R	D	R	I	V	V	R	D	A	D
Template Known Secondary structure		B													S	S	B					T	T	S	.	.	.			B																S				T	T	S
Template Predicted Secondary structure																									.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.				.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions