Return to main results Retrieve Phyre Job Id

Job DescriptionP39315
Confidence98.73%DateThu Jan 5 11:59:18 GMT 2012
Rank127Aligned Residues196
% Identity15%Templatec3gk3D_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:acetoacetyl-coa reductase; PDBTitle: crystal structure of acetoacetyl-coa reductase from2 burkholderia pseudomallei 1710b
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40... ......50.........60.........70.......
Predicted Secondary structure 










..

















..
Query SS confidence 









































. .

































. .
Query Sequence  IAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAA. . QGITVRQADYGDEAALTSALQGVEKLLLISSSEV. .
Query Conservation 







 

  

  

    
  
  
 
          ..  
  
  
  
      
               ..
Alig confidence 




















..


















..

































..
Template Conservation 






 


 


  
   ..
  


  
                                                
Template Sequence  AFVTGGMGGLGAAISRRLHDA. . GMAVAVSHSVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFGKVDVLINN
Template Known Secondary structure  TTTTST..T


T




TT
S

S
Template Predicted Secondary structure 




..





































Template SS confidence 















































































   7..10.........20....... ..30.........40.........50.........60.........70.........80....
 
   78.80.........90.........100.........110..... ....120..
Predicted Secondary structure  .........................















..........
Query SS confidence  . . . . . . . . . . . . . . . . . . . . . . . . .





































. . . . . . . . . .






Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . GQRAPQHRNVINAAKAAGVKFIAYTSLLHADTSPLGLA. . . . . . . . . . DEHIETE
Query Conservation  .........................                      
  

           ..........       
Alig confidence  .........................





































..........






Template Conservation                                                
   

            
  

 
       

Template Sequence  AGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAGIHGFTKTLA
Template Known Secondary structure 







TTT

TTT




TT
Template Predicted Secondary structure 





















































Template SS confidence 















































































   90.........100.........110.........120.........130.........140.........150.........160.........
 
   123......130.........140.........150.........160.........170.........180........ .190.........200
Predicted Secondary structure 








































..






Query SS confidence 

































































. .











Query Sequence  KMLADSGIVYTLLRNGWYSENYLASAPAALEHGVFIGAAGDGKIASATRADYAAAAARVISEAGHE. . GKVYELAGDSAW
Query Conservation                                                    


             ..            
Alig confidence 











































..



















..











Template Conservation         
 

 
 

 
 
                   
  
 ..  
 


  
  
 
  
  


  
 



  
Template Sequence  LETAKRGITVNTVSPGYLATAMVEAVPQDVLEAKILPQIPVGRL. . GRPDEVAALIAFLCSDDAGFVTGADLAINGGMHM
Template Known Secondary structure  SGGGT

B

S
TGGG
TT
S
..B
TSGGGTT

S
STTS

Template Predicted Secondary structure 























..












Template SS confidence 















































































   170.........180.........190.........200.........210... ......220.........230.........240.......
 
   201
Predicted Secondary structure 
Query SS confidence 
Query Sequence  T
Query Conservation 
Alig confidence 
Template Conservation   
Template Sequence  S
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   248
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions