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Job DescriptionP39315
Confidence98.93%DateThu Jan 5 11:59:18 GMT 2012
Rank98Aligned Residues198
% Identity15%Templatec3ftpD_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:3-oxoacyl-[acyl-carrier protein] reductase; PDBTitle: crystal structure of 3-ketoacyl-(acyl-carrier-protein)2 reductase from burkholderia pseudomallei at 2.05 a3 resolution
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40... ......50.........60.........70.....
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Query Sequence  IAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAA. . . . . . QGITVRQADYGDEAALTSALQGVEKLLLISSS
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Template Sequence  AIVTGASRGIGRAIALELARR. . GAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGALNV
Template Known Secondary structure  S
SST..T
SST




TT
S


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   10.........20.........30 .........40.........50.........60.........70.........80.......
 
   76. ..80.........90.........100.........110.........120........
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Query Sequence  EV. . . . . . . . . . . . . . . . . . . . . . . . . . . GQRAPQHRNVINAAKAAGVKFIAYTSLLHADTSPLGLADEHIETEKMLADS
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Template Sequence  LVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKAGVAGMT
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GGG

TT



T

TT
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   88.90.........100.........110.........120.........130.........140.........150.........160.......
 
   129130.........140.........150.........160.........170.........180........ .190.........200.
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Query Sequence  GIVYTLLRNGWYSENYLASAPAALEHGVFIGAAGDGKIASATRADYAAAAARVISEAGHE. . GKVYELAGDSAWT
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Template Sequence  RALAREIGSRGITVNCVAPGFIDTDEQQTALKTQIPLGRLGSPEDIAHAVAFLASPQAGYITGTTLHVNGGMFMS
Template Known Secondary structure  GGGT

SB




T
TT
S
B
SGGGTT

S
STTSS

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   168.170.........180.........190.........200.........210.........220.........230.........240..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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