Return to main results Retrieve Phyre Job Id

Job DescriptionP39315
Confidence96.03%DateThu Jan 5 11:59:18 GMT 2012
Rank461Aligned Residues82
% Identity16%Templatec3c7cB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:octopine dehydrogenase; PDBTitle: a structural basis for substrate and stereo selectivity in2 octopine dehydrogenase (odh-nadh-l-arginine)
Resolution3.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40... ......50...... ...60.....
Predicted Secondary structure 










....







............

Query SS confidence 









































. . . .












. . . . . . . . . . . .








Query Sequence  IAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAA. . . . QGITVRQADYGDE. . . . . . . . . . . . AALTSALQG
Query Conservation 







 

  

  

    
  
  
 
          ....  
  
  
  
 ............     
   
Alig confidence 





.














.


















....












............








Template Conservation 
 



.

 
 


  

   .
  
 
                                        

 
  


  
Template Sequence  VCVCGG. GNGAHTLSGLAASRD. GVEVRVLTLFADEAERWTKALGADELTVIVNEKDGTQTEVKSRPKVITKDPEIAISG
Template Known Secondary structure 

.STTST.T

STTTTS

TTS


SS
TT
Template Predicted Secondary structure 

.


.































Template SS confidence 















































































   5....10 .........20..... ....30.........40.........50.........60.........70.........80..
 
   66...70.........80.....
Predicted Secondary structure 








Query SS confidence 



















Query Sequence  VEKLLLISSSEVGQRAPQHR
Query Conservation                      
Alig confidence 



















Template Conservation 





 


     

  
Template Sequence  ADVVILTVPAFAHEGYFQAM
Template Known Secondary structure 
S
S
GGG
Template Predicted Secondary structure 




Template SS confidence 



















   83......90.........100..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions