Job Description P39315 Confidence 98.85% Date Thu Jan 5 11:59:18 GMT 2012 Rank 103 Aligned Residues 189 % Identity 15% Template c2vz8B_ PDB info PDB header:transferase Chain: B: PDB Molecule:fatty acid synthase; PDBTitle: crystal structure of mammalian fatty acid synthase Resolution 3.2 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.										.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.							.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Query Sequence		I	A	I	T	G	A	T	G	Q	L	G	H	Y	V	I	E	S	L	M	K	T	V	P	A	S	Q	I	V	A	I	V	R	N	P	A	K	A	Q	A	L	A	A	Q	.	.	.	.	.	.	.	.	.	G	I	T	V	R	Q	A	D	Y	G	D	E	A	A	L	T	S	A	L	Q	G	.	.	.	.	.	.	V
Query Conservation																																													.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Alig confidence																									.																				.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Template Conservation																									.
Template Sequence		Y	V	I	T	G	G	L	G	G	F	G	L	Q	L	A	Q	W	L	R	L	R	G	A	.	Q	K	L	V	L	T	S	R	S	G	I	R	T	G	Y	Q	A	R	Q	V	R	E	W	R	R	Q	G	V	Q	V	L	V	S	T	S	N	A	S	S	L	D	G	A	R	S	L	I	T	E	A	T	Q	L	G	P	V
Template Known Secondary structure						S	T	T	S													T	T		.								S	S				S													T	T										S	S	S															S
Template Predicted Secondary structure																									.
Template SS confidence
		1887	.	.	1890	.	.	.	.	.	.	.	.	.	1900	.	.	.	.	.	.	.	.	.		1910	.	.	.	.	.	.	.	.	.	1920	.	.	.	.	.	.	.	.	.	1930	.	.	.	.	.	.	.	.	.	1940	.	.	.	.	.	.	.	.	.	1950	.	.	.	.	.	.	.	.	.	1960	.	.	.	.	.
		67	.	.	70	.	.	.	.	.	.	.	.																	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.			.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.
Query Sequence		E	K	L	L	L	I	S	S	S	E	V	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	R	A	P	Q	H	R	N	V	I	N	A	A	K	A	A	.	.	G	V	K	F	I	A	Y	T	S	L	L	H	A	D	T	S	P	L	G	L	A	D	E	H	I	E	T	E	K	M	L	A	D	S
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.
Template Conservation
Template Sequence		G	G	V	F	N	L	A	M	V	L	R	D	A	V	L	E	N	Q	T	P	E	F	F	Q	D	V	S	K	P	K	Y	S	G	T	A	N	L	D	R	V	T	R	E	A	C	P	E	L	D	Y	F	V	I	F	S	S	V	S	C	G	R	G	N	A	G	Q	A	N	Y	G	F	A	N	S	A	M	E	R	I	C
Template Known Secondary structure																S	T	T			T	T						T	T	T	T																T	T														T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		1966	.	.	.	1970	.	.	.	.	.	.	.	.	.	1980	.	.	.	.	.	.	.	.	.	1990	.	.	.	.	.	.	.	.	.	2000	.	.	.	.	.	.	.	.	.	2010	.	.	.	.	.	.	.	.	.	2020	.	.	.	.	.	.	.	.	.	2030	.	.	.	.	.	.	.	.	.	2040	.	.	.	.	.
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	V	Y	T	L	L	R	N	G	W	Y	S	E	N	Y	L	A	S	A	P	A	A	L	E	H	G	V	F	I	G	A	A	G	D	G	K	I	A	S	A	T	R	A	D	Y	A	A	A	A	A	R	V	I	S	E	A	G	H	E	G	K	V	Y	E	L	A
Query Conservation
Alig confidence																														.	.	.	.
Template Conservation																														.	.	.	.
Template Sequence		E	K	R	R	H	D	G	L	P	G	L	A	V	Q	W	G	A	I	G	D	V	G	V	V	L	E	N	D	.	.	.	.	T	V	I	G	G	T	L	P	Q	R	I	A	S	C	L	E	V	L	D	L	F	L	S	Q	P	H	P	V	L	S	S	F	V	L	A
Template Known Secondary structure							T	T	S										B		T	T	S	T	T	T				.	.	.	.			T	T	S				B														T		S		S
Template Predicted Secondary structure																														.	.	.	.
Template SS confidence
		2046	.	.	.	2050	.	.	.	.	.	.	.	.	.	2060	.	.	.	.	.	.	.	.	.	2070	.	.	.					.	.	.	.	.	.	2080	.	.	.	.	.	.	.	.	.	2090	.	.	.	.	.	.	.	.	.	2100	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions