Job Description P39315 Confidence 100.00% Date Thu Jan 5 11:59:18 GMT 2012 Rank 2 Aligned Residues 280 % Identity 43% Template c2vrcD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:triphenylmethane reductase; PDBTitle: crystal structure of the citrobacter sp. triphenylmethane2 reductase complexed with nadp(h) Resolution 2.5 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.			.	.
Predicted Secondary structure																																																																														.	.
Query SS confidence																																																																														.	.
Query Sequence		I	A	I	T	G	A	T	G	Q	L	G	H	Y	V	I	E	S	L	M	K	T	V	P	A	S	Q	I	V	A	I	V	R	N	P	A	K	A	Q	A	L	A	A	Q	G	I	T	V	R	Q	A	D	Y	G	D	E	A	A	L	T	S	A	L	Q	G	V	E	K	L	L	L	I	S	S	S	E	V	.	.	G	Q
Query Conservation																																																																														.	.
Alig confidence																																																																														.	.
Template Conservation
Template Sequence		I	A	V	T	G	A	T	G	Q	L	G	G	L	V	I	Q	H	L	X	A	A	V	P	A	S	Q	I	I	A	I	V	R	N	V	E	K	A	S	T	L	A	D	Q	G	V	E	V	R	H	G	D	Y	N	Q	P	E	S	L	Q	K	A	F	A	G	V	S	K	L	L	F	I	S	G	P	H	Y	D	N	T	L
Template Known Secondary structure						S	T	T	S														S		G	G	G						S	S	G	G	G	G						T	T								T	T		G	G	G						T	T		S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		R	A	P	Q	H	R	N	V	I	N	A	A	K	A	A	G	V	K	F	I	A	Y	T	S	L	L	H	A	D	T	S	P	L	G	L	A	D	E	H	I	E	T	E	K	M	L	A	D	S	G	I	V	Y	T	L	L	R	N	G	W	Y	S	E	N	Y	L	A	.	S	A	P	A	A	L	E	H	G	V	F	I
Query Conservation																																																																					.
Alig confidence																																																																					.
Template Conservation
Template Sequence		L	I	V	Q	H	A	N	V	V	K	A	A	R	D	A	G	V	K	H	I	A	Y	T	G	Y	A	F	A	E	E	S	I	I	P	L	A	H	V	H	L	A	T	E	Y	A	T	R	T	T	N	I	P	Y	T	F	L	R	N	A	L	Y	T	D	F	F	V	N	E	G	L	R	A	S	T	E	S	G	A	I	V
Template Known Secondary structure																T	T		S								T	T	G	G	G		S	S															T	T	T											B	S	T	T	T	S	S	T	T								S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	A	G	D	G	K	I	A	S	A	T	R	A	D	Y	A	A	A	A	A	R	V	I	S	E	A	G	H	E	G	K	V	Y	E	L	A	G	D	S	A	W	T	L	T	Q	L	A	A	E	L	T	K	Q	S	G	K	Q	V	T	Y	Q	N	L	S	E	A	D	F	A	A	A	L	K	S	V	G	L	P	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	N	A	G	S	G	I	V	N	S	V	T	R	N	E	L	A	L	A	A	A	T	V	L	T	E	E	G	H	E	N	K	T	Y	N	L	V	S	N	Q	P	W	T	F	D	E	L	A	Q	I	L	S	E	V	S	G	K	K	V	V	H	Q	P	V	S	F	E	E	E	K	N	F	X	V	N	A	G	V	P	E
Template Known Secondary structure			S		T	T			B			B														T	S	S	S		T	T								S	S		B														S	S																			T	T
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	A	D	M	L	A	D	S	D	V	G	A	S	K	G	G	L	F	D	D	S	K	T	L	S	K	L	I	G	H	P	T	T	T	L	A	E	S	V	S	H	L	F
Query Conservation
Alig confidence																																.
Template Conservation																																.
Template Sequence		P	F	A	E	I	T	A	A	I	Y	D	A	I	S	K	G	E	A	S	K	T	S	D	D	L	Q	K	L	I	G	.	S	L	T	P	L	K	E	T	V	K	Q	A	L
Template Known Secondary structure															T	T	T	T	T					S								.	S										T	T
Template Predicted Secondary structure																																.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.		.	.	.	.	.	.	.	280	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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