Job Description P39315 Confidence 97.32% Date Thu Jan 5 11:59:18 GMT 2012 Rank 335 Aligned Residues 64 % Identity 16% Template c2uyyD_ PDB info PDB header:cytokine Chain: D: PDB Molecule:n-pac protein; PDBTitle: structure of the cytokine-like nuclear factor n-pac Resolution 2.5 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	I	T	G	A	T	G	Q	L	G	H	Y	V	I	E	S	L	M	K	T	V	P	A	S	Q	I	V	A	I	V	R	N	P	A	K	A	Q	A	L	A	A	Q	G	I	T	V	R	Q	A	D	Y	G	D	E	A	A	L	T	S	A	L	Q	G	V	E	K	L	L	L	I	S	S	S
Query Conservation
Alig confidence								.															.	.																											.	.	.	.	.	.	.
Template Conservation								.															.	.																											.	.	.	.	.	.	.
Template Sequence		I	G	F	L	G	L	.	G	L	M	G	S	G	I	V	S	N	L	L	K	M	.	.	G	H	T	V	T	V	W	N	R	T	A	E	K	C	D	L	F	I	Q	E	G	A	R	L	G	R	.	.	.	.	.	.	.	T	P	A	E	V	V	S	T	C	D	I	T	F	A	C	V	S	D
Template Known Secondary structure								.	S													T	.	.	T								S	S	G	G	G	G						T	T					S	.	.	.	.	.	.	.										S							S	S
Template Predicted Secondary structure								.															.	.																											.	.	.	.	.	.	.
Template SS confidence
		270	.	.	.	.	.		.	.	.	.	280	.	.	.	.	.	.	.	.	.			290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.								.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions