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Job DescriptionP39315
Confidence98.56%DateThu Jan 5 11:59:18 GMT 2012
Rank174Aligned Residues194
% Identity16%Templatec2uvdE_
PDB info PDB header:oxidoreductaseChain: E: PDB Molecule:3-oxoacyl-(acyl-carrier-protein) reductase; PDBTitle: the crystal structure of a 3-oxoacyl-(acyl carrier protein)2 reductase from bacillus anthracis (ba3989)
Resolution2.4 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.. .......40.... .....50.........60.... ...
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Query Sequence  IAITGATGQLGHYVIESLMKTVPASQIVAIV. RNPAKAQALAAQ. . . . . . GITVRQADYGDEAALTSALQ. . . . . . . GVE
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Template Sequence  ALVTGASRGIGRAIAIDLAKQ. . GANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQVD
Template Known Secondary structure  SS
SST..T
SS
TT



TT
S


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   7..10.........20....... ..30.........40.........50.........60.........70.........80....
 
   68.70....... ..80.........90.........100.........110.... ...
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Query Sequence  KLLLISSSEV. . . . . . . . . . . . . . . . . . . . GQRAPQHRNVINAAKAAGVKFIAYTSLLHADTSPLGL. . . . . . . . . . ADE
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Template Sequence  ILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGVIGL
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B
GGG

TT


T

TTB
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   85....90.........100.........110.........120.........130.........140.........150.........160....
 
   118.120.........130.........140.........150.........160.........170.........180...... ...190.....
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Query Sequence  HIETEKMLADSGIVYTLLRNGWYSENYLASAPAALEHGVFIGAAGDGKIASATRADYAAAAARVISEAG. . HEGKVYELA
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Template Sequence  TKTSAKELASRNITVNAIAPGFIATDMTDVLDENIKAEMLKLIPAAQ. . . FGEAQDIANAVTFFASDQSKYITGQTLNVD
Template Known Secondary structure  GGGT
SBGGG
SS


T
TT
S...
B
SGGGTT

S
S
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   165....170.........180.........190.........200.........210. ........220.........230.........240.
 
   196...200
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Query Sequence  GDSAW
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Template Sequence  GGMVM
Template Known Secondary structure  TTS

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   242....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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