Return to main results Retrieve Phyre Job Id

Job DescriptionP39315
Confidence96.57%DateThu Jan 5 11:59:18 GMT 2012
Rank415Aligned Residues101
% Identity20%Templatec2qz9B_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:aspartate-semialdehyde dehydrogenase; PDBTitle: crystal structure of aspartate semialdehyde dehydrogenase2 ii from vibrio cholerae
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20... ......30.........40.........50.........60.........70.........80
Predicted Secondary structure 





.























Query SS confidence 





















.
























































Query Sequence  IAITGATGQLGHYVIESLMKTV. PASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQGVEKLLLISSSEVGQR
Query Conservation 







 

  

  

   . 
  
  
 
            
  
  
  
      
                  
Alig confidence 





















.






























.....















.....
Template Conservation 
 
 



 

  
 


  
  
   
    
    

        
      .....      




 
 
 .....
Template Sequence  VAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKTYRFNGKTVRVQNVE. . . . . EFDWSQVHIALFSAGG. . . . .
Template Known Secondary structure  TTTSTT


SSSTT
TT
GG.....G

GGG
S
S
.....
Template Predicted Secondary structure 





















.....










.....
Template SS confidence 















































































   8.10.........20.........30.........40.........50.........60. ........70.......
 
   81........90.........100.........110....
Predicted Secondary structure 













Query SS confidence 

































Query Sequence  APQHRNVINAAKAAGVKFIAYTSLLHADTSPLGL
Query Conservation                     
  

          
Alig confidence  ..































Template Conservation  ..  
          
  




  

       
Template Sequence  . . ELSAKWAPIAAEAGVVVIDNTSHFRYDYDIPL
Template Known Secondary structure  ..TT

SSTTTT
TTS
B
Template Predicted Secondary structure  ..













Template SS confidence 

































   78.80.........90.........100.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions