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Job DescriptionP39315
Confidence99.96%DateThu Jan 5 11:59:18 GMT 2012
Rank26Aligned Residues256
% Identity14%Templatec2q1uA_
PDB info PDB header:sugar binding proteinChain: A: PDB Molecule:putative nucleotide sugar epimerase/ dehydratase; PDBTitle: crystal structure of the bordetella bronchiseptica enzyme wbmf in2 complex with nad+ and udp
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  IAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALA. . . AQGITVRQADYGDEAALTSALQGVEKLLLISSSEV.
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Template Sequence  VMVVGGAGFVGSNLVKRLLEL. . GVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQDEYDYVFHLATYHGN
Template Known Secondary structure  TTTST..T
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   15....20.........30..... ....40.........50.........60.........70.........80.........90..
 
   78.80.........90.........100.........110.........120...
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Query Sequence  . . . . . . . . . . . GQRAPQHRNVINAAKAAGVKFIAYTSLLHADTSPLGLADEHIETEK. . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  QSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQHQLPTVRA
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   93......100.........110.........120.........130.........140.........150.........160.........170..
 
   124.....130.........140.........150.........160.........170.........180.........190....
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Query Sequence  . . . . . . . . . MLADSGIVYTLLRNGWYSENYLASAPAALEHGVFIGAAGDGKIASATRADYAAAAARVISEAGHEGKVYEL
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Template Sequence  RFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIFVEDVANGLIACAA. DGTPGGVYNI
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   187..190.........200.........210.........220.........230.........240.........250..... ....260.....
 
   195....200.........210.........220.........230.........240.........250.........260.........270.. .
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Query Sequence  AGDSAWTLTQLAAELTKQSGKQVTYQNLSEADFAAALKSVGLPDGLADMLADSDVGASKGGLFDDSKTLSKLIGHPTT. T
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Template Sequence  ASGKETSIADLATKINEITGNNTELDRLPKR. . . . . . . . . . . . . . . . . . . . . . . PWDNSGKRFGSPEKARRELGFSADVS
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   266...270.........280.........290...... ...300.........310.........320..
 
   274.....280...
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Query Sequence  LAESVSHLFN
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Template Sequence  IDDGLRKTIE
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   323......330..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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