Phyre 2 alignment of P39315 with c2hrzA

Job Description P39315
Confidence 99.94% Date Thu Jan 5 11:59:18 GMT 2012

Rank 58 Aligned Residues 262

% Identity 14% Template c2hrzA_

PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:nucleoside-diphosphate-sugar epimerase; PDBTitle: the crystal structure of the nucleoside-diphosphate-sugar epimerase2 from agrobacterium tumefaciens

Resolution 1.85 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.								.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.
Query Sequence	I	A	I	T	G	A	T	G	Q	L	G	H	Y	V	I	E	S	L	M	K	T	V	P	A	S	Q	I	V	A	I	V	R	N	.	.	.	.	.	.	.	P	A	K	A	Q	A	L	A	A	Q	G	I	T	V	R	Q	A	D	Y	G	D	E	A	A	L	T	S	A	L	Q	G	V	E	K	L	L	L	I	S	S
Query Conservation																																		.	.	.	.	.	.	.
Alig confidence																						.	.											.	.	.	.	.	.	.
Template Conservation																						.	.
Template Sequence	I	A	I	I	G	A	A	G	X	V	G	R	K	L	T	Q	R	L	V	K	D	.	.	G	S	L	G	G	K	P	V	E	K	F	T	L	I	D	V	F	Q	P	E	A	P	A	G	F	S	G	A	V	D	A	R	A	A	D	L	S	A	P	G	E	A	E	K	L	V	E	A	R	P	D	V	I	F	H	L	A
Template Known Secondary structure					T	T	T	S														.	.				T	T											S	S						T	T			S									T	T	S	T	T								T			S
Template Predicted Secondary structure																						.	.
Template SS confidence
	11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.			.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.

	75	.	.	.	.	80	.	.	.	.	.	.	.																		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.															.	.	.	.	120	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	S	E	V	G	Q	R	A	P	Q	H	R	N	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	N	A	A	K	A	A	G	V	K	F	I	A	Y	T	S	L	L	H	A	D	T	S	P	L	G	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	E	H	I	E	T	E	K
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	A	I	V	S	G	E	A	E	L	D	F	D	K	G	Y	R	I	N	L	D	G	T	R	Y	L	F	D	A	I	R	I	A	N	G	K	D	G	Y	K	P	R	V	V	F	T	S	S	I	A	V	F	G	A	P	L	P	Y	P	I	P	D	E	F	H	T	T	P	L	T	S	Y	G	T	Q	K	A	I	C	E	L
Template Known Secondary structure																			T																													G	G	G			S	S			S	S	B		T	T						S	S
Template Predicted Secondary structure
Template SS confidence
	89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.

	124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.																	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.
Query Sequence	M	L	A	D	S	G	I	V	Y	T	L	L	R	N	G	W	Y	S	E	N	Y	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	A	P	A	A	L	E	H	G	V	F	I	G	A	A	G	D	G	K	I	A	S	A	T	R	A	D	Y	A	A	A	A	A	R	V	I	S	E	A	.	.
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.
Template Conservation
Template Sequence	L	L	S	D	Y	S	R	R	G	F	F	D	G	I	G	I	R	L	P	T	I	C	I	R	P	G	K	P	N	A	A	A	S	G	F	F	S	N	I	L	R	E	P	L	V	G	Q	E	A	V	L	P	V	P	E	S	I	R	H	W	H	A	S	P	R	S	A	V	G	F	L	I	H	G	A	X	I	D	V	E
Template Known Secondary structure								T	T	S												T	T			S	S				S	G	G	G											T	T							S		T	T																					S
Template Predicted Secondary structure
Template SS confidence
	169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.

	186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	G	H	E	G	K	V	Y	E	L	A	G	D	S	A	W	T	L	T	Q	L	A	A	E	L	T	K	Q	S	G	K	Q	V	T	Y	Q	N	L	S	E	A	D	F	A	A	A	L	K	S	V	G	L	P	D	G	L	A	D	M	L	A	D	S	D	V	G	A	S	K	G	G	L	F	D	D	S	K	T	L	S	K
Query Conservation
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	K	V	G	P	R	R	N	L	S	X	P	G	L	S	A	T	V	G	E	Q	I	E	A	L	R	K	V	A	G	E	K	A	V	A	L	I	R	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	P	N	E	X	I	X	R	X	C	E	G	W	A	P	G	F	E	A	K	R	A	R	E
Template Known Secondary structure				S																														T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T	S				B
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.																			.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310

	266	.	.	.	270	.	.		.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence	L	I	G	H	P	T	T	.	T	L	A	E	S	V	S	H	L	F	N	V
Query Conservation								.
Alig confidence	.							.
Template Conservation	.
Template Sequence	.	L	G	F	T	A	E	S	S	F	E	E	I	I	Q	V	H	I	E	D
Template Known Secondary structure	.	T	T					S	S
Template Predicted Secondary structure	.
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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