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Job DescriptionP39315
Confidence99.89%DateThu Jan 5 11:59:18 GMT 2012
Rank74Aligned Residues240
% Identity16%Templatec2ggsB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:273aa long hypothetical dtdp-4-dehydrorhamnose PDBTitle: crystal structure of hypothetical dtdp-4-dehydrorhamnose2 reductase from sulfolobus tokodaii
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.......
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Query Sequence  IAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQGVEKLLLISSSEV. . . .
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Template Sequence  TLITGASGQLGIELSRLLSER. . HEVIKVYNSS. . . . . . . . . EIQGGYKLDLTDFPRLEDFIIKKRPDVIINAAAMTDVD
Template Known Secondary structure  STTSTTT..S

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   3......10.........20... ......30... ......40.........50.........60.........70.
 
   78.80.........90.........100.........110........ .120.........130......
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Query Sequence  . . . . . . . . . . GQRAPQHRNVINAAKAAGVKFIAYTSLLHADTSPLGLADEH. . . . . . . . . . . IETEKMLADSGIVYTLLR
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Template Sequence  KCEIEKEKAYKINAEAVRHIVRAGKVIDSYIVHISTDYVFDGEKGNYKEEDIPNPINYYGLSKLLGETFALQDDSLIIRT
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   72.......80.........90.........100.........110.........120.........130.........140.........150.
 
   137..140.........150.........160.........170.........180.........190.........200.........210......
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Query Sequence  NGWYSENYLASAPAALEHGVFIGAAGDGKIASATRADYAAAAARVISEAGHEGKVYELAGDSAWTLTQLAAELTKQSGKQ
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Template Sequence  SGIFRNKGFPIYVYKTLKEGKTVFAFKGYYSPISARKLASAILELLELR. . KTGIIHVAG. ERISRFELALKIKEKFNLP
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   152.......160.........170.........180.........190.........200 ......... 210.........220........
 
   217..220.........230.........240.........250.........260.........270.....
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Query Sequence  VTYQNLSEADFAAALKSVGLPDGLADMLADSDVGASKGGLFDDSKTLSKLIGHPTTTLA
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Template Sequence  GEVKEVD. . . . . . . . . . . . . . . . . . . . EVRGWIAKRPYDSSLDSSRARKILSTDFYTLD
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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