Job Description P39315 Confidence 97.82% Date Thu Jan 5 11:59:18 GMT 2012 Rank 298 Aligned Residues 93 % Identity 13% Template c2g1uA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:hypothetical protein tm1088a; PDBTitle: crystal structure of a putative transport protein (tm1088a) from2 thermotoga maritima at 1.50 a resolution Resolution 1.50 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																													.																			.
Query SS confidence																																													.																			.
Query Sequence		I	A	I	T	G	A	T	G	Q	L	G	H	Y	V	I	E	S	L	M	K	T	V	P	A	S	Q	I	V	A	I	V	R	N	P	A	K	A	Q	A	L	A	A	Q	.	G	I	T	V	R	Q	A	D	Y	G	D	E	A	A	L	T	S	A	.	L	Q	G	V	E	K	L	L	L	I	S	S	S	E	V	G	Q
Query Conservation																																													.																			.
Alig confidence								.															.	.																					.																			.												.	.	.	.	.
Template Conservation								.															.	.																																																				.	.	.	.	.
Template Sequence		I	V	I	F	G	C	.	G	R	L	G	S	L	I	A	N	L	A	S	S	S	.	.	G	H	S	V	V	V	V	D	K	N	E	Y	A	F	H	R	L	N	S	E	F	S	G	F	T	V	V	G	D	A	A	E	F	E	T	L	K	E	C	G	M	E	K	A	D	M	V	F	A	F	T	.	.	.	.	.	N
Template Known Secondary structure								.	S													T	.	.	T								S		G	G	G	G	G	G	S		T	T			S					S		T	T	S						T	T	T	G	G	G		S						S	.	.	.	.	.	S
Template Predicted Secondary structure								.															.	.																																																				.	.	.	.	.
Template SS confidence
		10	.	.	.	.	.		.	.	.	.	20	.	.	.	.	.	.	.	.	.			30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80						.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	P	Q	H	R	N	V	I	N	A	A	K	A	A	G	V	K	F	I	A	Y	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	D	S	T	N	F	F	I	S	M	N	A	R	Y	M	F	N	V	E	N	V	I	A
Template Known Secondary structure																T	S			S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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