Job Description P39315 Confidence 98.60% Date Thu Jan 5 11:59:18 GMT 2012 Rank 161 Aligned Residues 192 % Identity 17% Template c2ekqB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:2-deoxy-d-gluconate 3-dehydrogenase; PDBTitle: structure of tt0495 protein from thermus thermophilus Resolution 1.80 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.							.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.
Query Sequence		I	A	I	T	G	A	T	G	Q	L	G	H	Y	V	I	E	S	L	M	K	T	V	P	A	S	Q	I	V	A	I	V	R	N	P	A	K	A	Q	A	L	A	A	Q	G	I	T	V	R	Q	A	D	Y	G	D	.	.	.	.	.	.	E	A	A	L	T	S	A	L	Q	G	V	E	K	L	L	L	I	S	S	S
Query Conservation																																																								.	.	.	.	.	.
Alig confidence																							.	.																.	.															.	.	.	.	.	.
Template Conservation																							.	.																.	.
Template Sequence		A	L	V	T	G	G	S	R	G	I	G	R	A	I	A	E	A	L	V	A	R	.	.	G	Y	R	V	A	I	A	S	R	N	P	E	E	A	A	.	.	Q	S	L	G	A	V	P	L	P	T	D	L	E	K	D	D	P	K	G	L	V	K	R	A	L	E	A	L	G	G	L	H	V	L	V	H	A	A	A	V
Template Known Secondary structure						T	T	T	S													T	.	.	T								S	S						.	.				T								T	T	T	S														T	S
Template Predicted Secondary structure																							.	.																.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.			.	.	.	.	30	.	.	.	.	.	.	.	.	.	40			.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		76	.																					.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Q	R	A	P	Q	H	R	N	V	I	N	A	A	K	A	A	G	V	K	F	I	A	Y	T	S	L	L	H	A	D	T	S	P	L	G	L	A	D	E	H	I	E	T	E	K	M	L	A	D	S	G	I	V	Y	T	L	L
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	V	R	K	P	A	L	E	L	S	Y	E	E	W	R	R	V	L	Y	L	H	L	D	V	A	F	L	L	A	Q	A	A	A	P	H	M	A	E	A	G	W	G	R	V	L	F	I	G	S	V	T	T	F	T	A	G	G	P	V	P	I	P	A	Y	T	T	A	K	T	A	L	L	G	L	T	R	A	L	A	K
Template Known Secondary structure							T	T	T														T																		T										G	G	G	T	S			T	T	S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.												.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.			.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.																						.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.	.																						.	.
Query Sequence		R	N	G	W	Y	S	E	N	Y	L	A	S	A	P	A	A	L	E	H	G	V	F	I	G	A	A	G	D	G	K	.	.	.	.	.	.	.	.	.	.	.	I	A	S	A	T	R	A	D	Y	A	A	A	A	A	R	V	I	S	E	A	G	.	.	H	E	G	K	V	Y	E	L	A	G	D
Query Conservation																																.	.	.	.	.	.	.	.	.	.	.																						.	.
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Conservation
Template Sequence		E	W	A	R	L	G	I	R	V	N	L	L	C	P	G	Y	V	E	T	E	F	T	L	P	L	R	Q	N	P	E	L	Y	E	P	I	T	A	R	I	P	M	G	R	W	A	R	P	E	E	I	A	R	V	A	A	V	L	C	G	D	E	A	E	Y	L	T	G	Q	A	V	A	V	D	G	G
Template Known Secondary structure				G	G	G	T										S	B		S	G	G	G					T										T	T		T	T	S	S		B													T	S	G	G	G	T	T			S						S	T	T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions