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Job DescriptionP39315
Confidence99.96%DateThu Jan 5 11:59:18 GMT 2012
Rank17Aligned Residues256
% Identity13%Templatec2c20D_
PDB info PDB header:isomeraseChain: D: PDB Molecule:udp-glucose 4-epimerase; PDBTitle: crystal structure of udp-glucose 4-epimerase
Resolution2.7 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.......
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Query Sequence  IAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQGVEKLLLISSSEV. . . .
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Template Sequence  ILICGGAGYIGSHAVKKLVDE. . GLSVVVVDNLQTGHEDAITEGAKFYNGDLRDKAFLRDVFTQENIEAVMHFAADSLVG
Template Known Secondary structure  TTTST..T



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   4.....10.........20.... .....30.........40.........50.........60.........70.........80.
 
   78.80.........90.........100.........110..... ....120.........
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Query Sequence  . . . . . . . . . . GQRAPQHRNVINAAKAAGVKFIAYTSLLHADTSPLGLA. . . . . . . . . . . . . . . . . . DEHIETEKMLADSG
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Template Sequence  VSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQASN
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GGGG




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   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
   130.........140........ .150.........160.........170.........180.....
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Query Sequence  IVYTLLRNGWYSENYLASA. . . . . . . . . . . . . . . . . . . . . . . . PAALEHGVFIGAAGDGKIASATRADYAAAAARVISEA
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Template Sequence  LRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLVAAHFLGLKDL
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   162.......170.........180.........190.........200.........210.........220.........230.........240.
 
   186. ..190.........200.........210.........220.........230.........240.........250.........260...
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Query Sequence  GH. . EGKVYELAGDSAWTLTQLAAELTKQSGKQVTYQNLSEADFAAALKSVGLPDGLADMLADSDVGASKGGLFDDSKTL
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Template Sequence  QNGGESDFYNLGNGNGFSVKEIVDAVREVTNHEIPAEVAPR. . . . . . . . . . . . . . . . . . . . . . . . RAGDPARLVASSQKA
Template Known Secondary structure  TT





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   242.......250.........260.........270.........280.. .......290.......
 
   264.....270.. .......280...
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Query Sequence  SKLIGHPTT. . TLAESVSHLFN
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Template Sequence  KEKLGWDPRYVNVKTIIEHAWN
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   298.300.........310.........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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