Return to main results Retrieve Phyre Job Id

Job DescriptionP39315
Confidence96.71%DateThu Jan 5 11:59:18 GMT 2012
Rank402Aligned Residues116
% Identity14%Templatec1ys4A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:aspartate-semialdehyde dehydrogenase; PDBTitle: structure of aspartate-semialdehyde dehydrogenase from2 methanococcus jannaschii
Resolution2.29 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50......... 60.........70.
Predicted Secondary structure 


















..........



Query SS confidence 

























































. . . . . . . . . .











Query Sequence  IAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAAL. . . . . . . . . . TSALQGVEKLLL
Query Conservation 







 

  

  

    
  
  
 
            
  
  
  
    ..........  
         
Alig confidence 






















.

































..........











Template Conservation 







 

  
 


  

 . 

  
  
    
                                     



 
Template Sequence  VGVLGATGSVGQRFVQLLADHPX. FELTALAASERSAGKKYKDACYWFQDRDIPENIKDXVVIPTDPKHEEFEDVDIVFS
Template Known Secondary structure  TTTSTT
SS.
TTTTTSBS



SS


T
B
S
TTSGGGTT

Template Predicted Secondary structure 







.


































Template SS confidence 















































































   11........20.........30... ......40.........50.........60.........70.........80.........
 
   72.......80.........90.........100.........110.........120.....
Predicted Secondary structure 






















Query SS confidence 





















































Query Sequence  ISSSEVGQRAPQHRNVINAAKAAGVKFIAYTSLLHADTSPLGLADEHIETEKML
Query Conservation                              
  

                     
Alig confidence 



.......










































Template Conservation 
 
 .......  
          
  





  
         
      
 
Template Sequence  ALPS. . . . . . . DLAKKFEPEFAKEGKLIFSNASAYRXEEDVPLVIPEVNADHLE
Template Known Secondary structure 


.......TT


STTTT
TTS
B

GGGGG
Template Predicted Secondary structure 


.......





















Template SS confidence 





















































   90... ......100.........110.........120.........130......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions