Return to main results Retrieve Phyre Job Id

Job DescriptionP39315
Confidence97.75%DateThu Jan 5 11:59:18 GMT 2012
Rank306Aligned Residues96
% Identity14%Templatec1vpdA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:tartronate semialdehyde reductase; PDBTitle: x-ray crystal structure of tartronate semialdehyde reductase2 [salmonella typhimurium lt2]
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  IAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQGVEKLLLISSSEVGQRA
Query Conservation 







 

  

  

    
  
  
 
            
  
  
  
      
                   
Alig confidence 





.













..

























.......























Template Conservation 




 .
 

  

  

  ..
  
   

       
   
     .......
  
    

 
   
        
Template Sequence  VGFIGL. GIXGKPXSKNLLKA. . GYSLVVSDRNPEAIADVIAAGAETAS. . . . . . . TAKAIAEQCDVIITXLPNSPHVKE
Template Known Secondary structure 

.STTT..T

S
TT

S.......S
S

SS
Template Predicted Secondary structure 

.




..








.......








Template SS confidence 















































































   5....10 .........20.... .....30.........40.........50 .........60.........70....
 
   82.......90.........100.......
Predicted Secondary structure 






Query SS confidence 

























Query Sequence  PQHRNVINAAKAAGVKFIAYTSLLHA
Query Conservation                    
  

   
Alig confidence 

























Template Conservation                   

  

  
Template Sequence  VALGENGIIEGAKPGTVLIDXSSIAP
Template Known Secondary structure  STT


TT

S


Template Predicted Secondary structure 









Template SS confidence 

























   75....80.........90.........100
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions