Job Description P39315 Confidence 97.30% Date Thu Jan 5 11:59:18 GMT 2012
Rank 336 Aligned Residues 101
% Identity 16% Template c1mldA_
PDB info
PDB header: oxidoreductase(nad(a)-choh(d))Chain: A: PDB Molecule: malate dehydrogenase;
PDBTitle: refined structure of mitochondrial malate dehydrogenase2 from porcine heart and the consensus structure for3 dicarboxylic acid oxidoreductases
Resolution 1.83 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
   
2 . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40
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Predicted Secondary structure  
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Query Sequence  
I A I T G A T G Q L G H Y V I E S L M K T V P A S Q I V A I V R N P A K A Q A .
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L A A Q G I T V R Q A D Y G D E A A L T S A L Q G V E K L L L I S S S E V .
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Query Conservation  
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Alig confidence  
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Template Conservation  
                                                                                                   
Template Sequence  
V A V L G A S G G I G Q P L S L L L K N S P L V S R L T L Y D I A H T P G V A A D L S H I E T R A T V K G Y L G P E Q L P D C L K G C D V V V I P A G V P R K P
Template Known Secondary structure  
T T T S T T T T T S S S S T T S S S S S G G G T T S S T
Template Predicted Secondary structure  
Template SS confidence  
   
3 . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70 . . . . . . . . . 80 . .
 
   
78 . 80 . . . . . . . . . 90 . . . . . . . . . 100 . .
Predicted Secondary structure  
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Query Sequence  
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G Q R A P Q H R N V I N A A K A A G V K F I A Y T
Query Conservation  
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Alig confidence  
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Template Conservation  
                                       
Template Sequence  
G M T R D D L F N T N A T I V A T L T A A C A Q H C P D A M I C I
Template Known Secondary structure  
T G G G G T T S
Template Predicted Secondary structure  
Template SS confidence  
   
83 . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . .
 
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]