 |
Job Description | P77268 | Confidence | 97.95% | Date | Thu Jan 5 12:27:01 GMT 2012 |
Rank | 102 | Aligned Residues | 43 |
% Identity | 21% | Template | c3qkuB_ |
PDB info |
PDB header:replication | Chain: B: PDB Molecule:dna double-strand break repair rad50 atpase; |
PDBTitle: mre11 rad50 binding domain in complex with rad50 and amp-pnp
|
Resolution | 3.30 Å |
|
  |   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | I | Q | Q | L | H | L | S | F | P | G | F | N | G | D | V | H | A | L | N | N | V | S | L | Q | I | N | R | G | E | I | V | G | L | V | G | E | S | G | S | G | K | S | V | T | A | M | L | I | M |
Query Conservation |   |
|
|   |
|
|   |   |   |
|   |   |   |   |
|   |   |   |
|
|   |   |
|
|
|   |
|   |   |
|
|
|   |
|
|
|
|   |
|
|
|
|
|
|
|
|   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|   |
| . | . | . | . | . | . |   |
|
|   |   |   |   |   |   |   |
|   |
|   |   |   | . |
|   |
|
|   |
|   |
|
|
|
|
|
|
|
|
|   |
|
|   |
Template Sequence |   |
K | L | E | R | V | T | V | . |
. |
. |
. |
. |
. |
K | N | F | R | S | H | S | D | T | V | V | E | F | K | E | G | . |
I | N | L | I | I | G | Q | N | G | S | G | K | S | S | L | L | D | A | I | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  | T | T |  |  |  |  |  |  |  |
|
| S |  | . |  |  |  |  |  |  |
| T | T | S | S |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  | . | . | . | . | . | . |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
| . |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | |
|
|
|
|
|
. | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | |
. | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|