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Job DescriptionP77268
Confidence100.00%DateThu Jan 5 12:27:01 GMT 2012
Rank9Aligned Residues252
% Identity30%Templatec3dhwC_
PDB info PDB header:membrane protein/hydrolaseChain: C: PDB Molecule:methionine import atp-binding protein metn; PDBTitle: crystal structure of methionine importer metni
Resolution3.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60.........70.........80....
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Query Sequence  VLDIQQLHLSFPGFNGDVHALNNVSLQINRGEIVGLVGESGSGKSVTAMLIMRLLPTGSYCVHRGQISLLGEDVLNAREK
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Template Sequence  MIKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPT. . . . . EGSVLVDGQELTTLSES
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   1........10.........20.........30.........40.........50........ .60.........70.....
 
   85....90.........100.........110.........120.........130.........140.........150.........160....
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Query Sequence  QLRQWRGARVAMIFQEPMTALNPTRRIGLQMMDVIRHHQPISRREARAKAIDLLEEMQIPDAVEVMSRYPFELSGGMRQR
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Template Sequence  ELTKAR. RQIGMIFQH. . FNLLSSRTVFGNVALPLEL. DNTPKDEVKRRVTELLSLVGL. . . GDKHDSYPSNLSGGQKQR
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   76...80. ........90 .........100......... 110.........120.........130 .........140........
 
   165....170.........180.........190.........200.........210.........220.........230.........240....
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Query Sequence  VMIALAFSCEPQLIIADEPTTALDVTVQLQVLRLLKHKARASGTAVLFISHDMAVVSQLCDSVYVMYAGSVIESGVTADV
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Template Sequence  VAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQDTVSEV
Template Known Secondary structure  T

SSGGGSS


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   149150.........160.........170.........180.........190.........200.........210.........220........
 
   245....250.........260........
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Query Sequence  IHHPRHPYTIGLLQCAPEHGVPRQ
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Template Sequence  FSHPKTPLAQKFIQSTLHLDIPED
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   229230.........240.........250..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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