Job Description P77268 Confidence 100.00% Date Thu Jan 5 12:27:01 GMT 2012 Rank 57 Aligned Residues 232 % Identity 25% Template c2ygrD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:uvrabc system protein a; PDBTitle: mycobacterium tuberculosis uvra Resolution 3.40 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.
Query SS confidence																																																						.	.
Query Sequence		T	Q	P	V	L	D	I	Q	Q	L	H	L	S	F	P	G	F	N	G	D	V	H	A	L	N	N	V	S	L	Q	I	N	R	G	E	I	V	G	L	V	G	E	S	G	S	G	K	S	V	T	A	M	.	.	L	I	M	R	L	L	P	T	G	S	Y	C	V	H	R	G	Q	I	S	L	L	G	E	D	V	L
Query Conservation																																																						.	.
Alig confidence														.	.	.	.	.	.	.	.	.																																.	.										.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.																																											.	.	.	.	.
Template Sequence		P	R	R	Q	L	T	V	V	G	A	R	E	.	.	.	.	.	.	.	.	.	H	N	L	R	G	I	D	V	S	F	P	L	G	V	L	T	S	V	T	G	V	S	G	S	G	K	S	T	L	V	N	D	I	L	A	A	V	L	A	N	R	L	.	.	.	.	.	N	G	A	R	Q	V	P	G	R	H	T	R
Template Known Secondary structure		T	T	S									S	.	.	.	.	.	.	.	.	.	T	T			S							S	S	S							S	T	T	S	S								T									T	.	.	.	.	.	S								S	S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.																																											.	.	.	.	.
Template SS confidence
		623	.	.	.	.	.	.	630	.	.	.	.										.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.						.	.	.	680	.	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	A	R	E	K	Q	L	R	Q	W	R	G	A	R	V	A	M	I	F	Q	E	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.
Template Sequence		V	T	G	L	D	Y	L	.	.	.	.	.	D	K	L	V	R	I	D	Q	S	P	I	G	R	T	P	R	S	N	P	A	T	Y	T	G	V	F	D	K	I	R	T	L	F	A	A	T	N	E	A	K	V	R	G	Y	K	P	G	R	F	S	F	N	V	K	G	G	R	C	E	A	C	T	G	D	G	T	I	K
Template Known Secondary structure					G	G	G		.	.	.	.	.									S		S		S	S	T	T		S						T											T	S					T	T	T			G	G	G	S		T	T	S	T	T	T	B		S	S	S	T	T	S	S
Template Predicted Secondary structure									.	.	.	.	.
Template SS confidence
		689	690	.	.	.	.	.						.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.
																															102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	T	A	L	N	P	T	R	R	I	G	L	Q	M	M	D	V	I	R	H	H	Q	P	I	S	R	R	E	A	R	A	K	A	I	D	L	L	E	E	M	Q	I	P	D	A	V	E	V	M	S	R
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.															.	.
Template Conservation																																																									.	.	.															.	.
Template Sequence		I	E	M	N	F	L	P	D	V	Y	V	P	C	E	V	C	Q	G	A	R	Y	N	R	E	T	L	E	V	H	Y	K	G	K	T	V	S	E	V	L	D	M	S	I	E	E	A	A	E	F	F	E	P	I	A	G	.	.	.	V	H	R	Y	L	R	T	L	V	D	V	G	L	G	.	.	Y	V	R	L	G	Q
Template Known Secondary structure					S	S	S								T	T	T	T	S		S	B						T			B	T	T	B							T	S	B								S	T	T				.	.	.											S	S		S	.	.	S	S	B	T	T
Template Predicted Secondary structure																																																									.	.	.															.	.
Template SS confidence
		764	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.				.	820	.	.	.	.	.	.	.	.	.	830	.	.			.	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.				.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.
Query SS confidence																								.	.	.
Query Sequence		Y	P	F	E	L	S	G	G	M	R	Q	R	V	M	I	A	L	A	F	S	C	E	.	.	.	P	Q	L	I	I	A	D	E	P	T	T	A	L	D	V	T	V	Q	L	Q	V	L	R	L	L	K	H	K	A	R	A	S	G	T	A	V	L	F	I	S	H	D	M	A	V	V	S	Q	L	C	D	S	V	Y	V
Query Conservation																								.	.	.
Alig confidence																								.	.	.																																.																	.
Template Conservation																																																										.																	.
Template Sequence		P	A	P	T	L	S	G	G	E	A	Q	R	V	K	L	A	S	E	L	Q	K	R	S	T	G	R	T	V	Y	I	L	D	E	P	T	T	G	L	H	F	D	D	I	R	K	L	L	N	V	I	N	G	L	V	D	K	.	G	N	T	V	I	V	I	E	H	N	L	D	V	I	K	T	.	S	D	W	I	I	D
Template Known Secondary structure			G	G	G	S														S	S	S				S	S							S	S	S	T	T																				.	T																.		S
Template Predicted Secondary structure																																																										.																	.
Template SS confidence
		839	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.		.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910		.	.	.	.	.	.
		230							.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure			.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.
Query Sequence		M	.	.	.	.	.	.	Y	A	G	S	V	I	E	S	G	V	T	A	D	V	I	H	H	P	R	H	P	Y	T	I	G	L	L	Q	C	A
Query Conservation			.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.																					.
Template Conservation																													.
Template Sequence		L	G	P	E	G	G	A	G	G	G	T	V	V	A	Q	G	T	P	E	D	V	A	A	V	P	A	S	.	Y	T	G	K	F	L	A	E	V
Template Known Secondary structure				S	S	S	T	T	S		S						S						T	T		S	S		.							T	T	T
Template Predicted Secondary structure																													.
Template SS confidence
		917	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.		.	.	.	.	.	.	950	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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