Job Description P77268 Confidence 100.00% Date Thu Jan 5 12:27:01 GMT 2012 Rank 55 Aligned Residues 213 % Identity 19% Template c2r6fA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:excinuclease abc subunit a; PDBTitle: crystal structure of bacillus stearothermophilus uvra Resolution 3.20 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	N	N	V	S	L	Q	I	N	R	G	E	I	V	G	L	V	G	E	S	G	S	G	K	S	V	T	A	M	L	I	M	R	L	L	P	T	G	S	Y	C	V	H	R	G	Q	I	S	L	L	G	E	D	V	L	N	A	R	E	K	Q	L	R	Q	W	R	G	A	R	V	A	M	I	F	Q	E	P	M	T
Query Conservation
Alig confidence																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	F	A	S	T	N	E	A	K	V	R	G	Y	K	K	G	R	F	S	F	N	V	K	G	G	R	C	E	A	C	H	G	D	G	I	I	K	I	E	X	H	F	L	P	D	V	Y	V	P	C	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	H	G	K	R	Y	N	R	E	T	L	E
Template Known Secondary structure					T	S						T	T			T	T	T	T		T	T	S	T	T	T	B		T	T	T	T	T		S							S	S	S								T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T			B		T	T	G	G	G
Template Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.																	.	.	.	.	.	.	.	.	770	.	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.		.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.				.	.	.	.	.
Predicted Secondary structure															.																																																											.	.	.
Query SS confidence															.																																																											.	.	.
Query Sequence		A	L	N	P	T	R	R	I	G	L	Q	M	M	.	D	V	I	R	H	H	Q	P	I	S	R	R	E	A	R	A	K	A	I	D	L	L	E	E	M	Q	I	P	D	A	V	E	V	M	S	R	Y	P	F	E	L	S	G	G	M	R	Q	R	V	M	I	A	L	A	F	S	C	E	.	.	.	P	Q	L	I	I
Query Conservation															.																																																											.	.	.
Alig confidence															.																													.	.																													.	.	.
Template Conservation																																												.	.
Template Sequence		V	T	Y	K	G	K	N	I	A	E	V	L	D	X	T	V	E	D	A	L	D	F	F	A	S	I	P	K	I	K	R	K	L	E	T	L	Y	D	V	G	L	G	.	.	Y	X	K	L	G	Q	P	A	T	T	L	S	G	G	E	A	Q	R	V	K	L	A	A	E	L	H	R	R	S	N	G	R	T	L	Y	I
Template Known Secondary structure				B	T	T	B							T	S	B								T		S														T	T		S	.	.	S	S	B	T	T			G	G	G																S	S				S
Template Predicted Secondary structure																																												.	.
Template SS confidence
		774	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.			.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230							.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.
Query Sequence		A	D	E	P	T	T	A	L	D	V	T	V	Q	L	Q	V	L	R	L	L	K	H	K	A	R	A	S	G	T	A	V	L	F	I	S	H	D	M	A	V	V	S	Q	L	C	D	S	V	Y	V	M	.	.	.	.	.	.	Y	A	G	S	V	I	E	S	G	V	T	A	D	V	I	H	H	P	R	H	P	Y	T
Query Conservation																																																					.	.	.	.	.	.
Alig confidence																												.																	.								.	.	.	.	.	.
Template Conservation																												.																	.
Template Sequence		L	D	E	P	T	T	G	L	H	V	D	D	I	A	R	L	L	D	V	L	H	R	L	V	D	N	.	G	D	T	V	L	V	I	E	H	N	L	D	V	I	K	T	.	A	D	Y	I	I	D	L	G	P	E	G	G	D	R	G	G	Q	I	V	A	V	G	T	P	E	E	V	A	E	V	K	E	S	H	T	G
Template Known Secondary structure					T	T	T	T																			T	.	T														T	T	.		S							S	S	S	T	T	S			S						S						T		T	T
Template Predicted Secondary structure																												.																	.
Template SS confidence
		852	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.		.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.		.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.
		254	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	Y	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		930	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions