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Job DescriptionP77268
Confidence100.00%DateThu Jan 5 12:27:01 GMT 2012
Rank34Aligned Residues217
% Identity21%Templatec2nq2C_
PDB info PDB header:metal transportChain: C: PDB Molecule:hypothetical abc transporter atp-binding protein PDBTitle: an inward-facing conformation of a putative metal-chelate2 type abc transporter.
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  QPVLDIQQLHLSFPGFNGDVHALNNVSLQINRGEIVGLVGESGSGKSVTAMLIMRLLPTGSYCVHRGQISLLGEDVLNAR
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Template Sequence  NKALSVENLGFYY. . . QAENFLFQQLNFDLNKGDILAVLGQNGCGKSTLLDLLLGIHRPIQGKIEV. . . . . . . . . . . . . .
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...TTTTTT


SSSSTTSS

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   2.......10.... .....20.........30.........40.........50.........60....
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  EKQLRQWRGARVAMIFQEPMTALNPTRRIGLQMMDVIRHHQPISRREARAKAIDLLEEMQIPDAVEVMSRYPFELSGGMR
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Template Sequence  . . . . . . . . YQSIGFVPQF. . FSSPFAYSVLDIVLMGRSTHINTFAKPKSHDYQVAMQALDYLNLTHLAKREFTSLSGGQR
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BGGGGGGS
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TT
GGGTTSBGGGS
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   65....70.... .....80.........90.........100.........110.........120.........130....
 
   163......170.........180.........190.........200.........210.........220.........230.........240..
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Query Sequence  QRVMIALAFSCEPQLIIADEPTTALDVTVQLQVLRLLKHKARASGTAVLFISHDMAVVSQLCDSVYVMYAGSVIESGVTA
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Template Sequence  QLILIARAIASECKLILLDEPTSALDLANQDIVLSLLIDLAQSQNMTVVFTTHQPNQVVAIANKTLLLNKQNFK. FGETR
Template Known Secondary structure  TT
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   135....140.........150.........160.........170.........180.........190.........200........ .210...
 
   243....
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Query Sequence  DVIHH
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Template Sequence  NILTS
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   214....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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