Job Description P77268 Confidence 100.00% Date Thu Jan 5 12:27:01 GMT 2012 Rank 5 Aligned Residues 237 % Identity 30% Template c2it1B_ PDB info PDB header:transport protein Chain: B: PDB Molecule:362aa long hypothetical maltose/maltodextrin PDBTitle: structure of ph0203 protein from pyrococcus horikoshii Resolution 1.94 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	T	Q	P	V	L	D	I	Q	Q	L	H	L	S	F	P	G	F	N	G	D	V	H	A	L	N	N	V	S	L	Q	I	N	R	G	E	I	V	G	L	V	G	E	S	G	S	G	K	S	V	T	A	M	L	I	M	R	L	L	P	T	G	S	Y	C	V	H	R	G	Q	I	S	L	L	G	E	D	V	L	N
Query Conservation
Alig confidence				.	.	.											.	.	.	.																																												.	.	.	.	.
Template Conservation				.	.	.											.	.	.	.																																												.	.	.	.	.
Template Sequence		V	E	.	.	.	I	K	L	E	N	I	V	K	K	F	.	.	.	.	G	N	F	T	A	L	N	N	I	N	L	K	I	K	D	G	E	F	M	A	L	L	G	P	S	G	S	G	K	S	T	L	L	Y	T	I	A	G	I	Y	K	P	T	.	.	.	.	.	S	G	K	I	Y	F	D	E	K	D	V	T	E
Template Known Secondary structure				.	.	.											.	.	.	.	T	T													T	T									T	T	S	S										T	S	S			S	.	.	.	.	.							T	T				T	T
Template Predicted Secondary structure				.	.	.											.	.	.	.																																												.	.	.	.	.
Template SS confidence
		2	.				.	.	.	.	.	.	10	.	.	.					.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.						.	.	.	60	.	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	E	K	Q	L	R	Q	W	R	G	A	R	V	A	M	I	F	Q	E	P	M	T	A	L	N	P	T	R	R	I	G	L	Q	M	M	D	V	I	R	H	H	Q	P	I	S	R	R	E	A	R	A	K	A	I	D	L	L	E	E	M	Q	I	P	D	A	V	E	V	M	S	R	Y	P	F	E	L	S	G	G
Query Conservation
Alig confidence							.	.	.	.	.	.										.	.																				.																						.	.	.
Template Conservation							.	.	.	.	.	.										.	.																				.																						.	.	.
Template Sequence		L	P	P	K	D	.	.	.	.	.	.	R	N	V	G	L	V	F	Q	N	.	.	W	A	L	Y	P	H	M	T	V	Y	K	N	I	A	F	P	L	E	L	.	R	K	A	P	R	E	E	I	D	K	K	V	R	E	V	A	K	M	L	H	I	.	.	.	D	K	L	L	N	R	Y	P	W	Q	L	S	G	G
Template Known Secondary structure		S					.	.	.	.	.	.		T						T	T	.	.					T	T	S													.	T	T																	T	T		.	.	.	G	G	G	T	T	S		G	G	G	S
Template Predicted Secondary structure							.	.	.	.	.	.										.	.																				.																						.	.	.
Template SS confidence
		70	.	.	.	.							.	.	.	.	.	80	.	.	.			.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.				.	.	.	.	.	.	130	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		M	R	Q	R	V	M	I	A	L	A	F	S	C	E	P	Q	L	I	I	A	D	E	P	T	T	A	L	D	V	T	V	Q	L	Q	V	L	R	L	L	K	H	K	A	R	A	S	G	T	A	V	L	F	I	S	H	D	M	A	V	V	S	Q	L	C	D	S	V	Y	V	M	Y	A	G	S	V	I	E	S	G	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	Q	Q	R	V	A	I	A	R	A	L	V	K	E	P	E	V	L	L	L	D	E	P	L	S	N	L	D	A	L	L	R	L	E	V	R	A	E	L	K	R	L	Q	K	E	L	G	I	T	T	V	Y	V	T	H	D	Q	A	E	A	L	A	M	A	D	R	I	A	V	I	R	E	G	E	I	L	Q	V	G	T
Template Known Secondary structure													T	T			S						S	G	G	G	G	S																				T								S										S							T	T
Template Predicted Secondary structure
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	D	V	I	H	H	P	R	H	P	Y	T	I	G	L	L	Q	C	A	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	D	E	V	Y	Y	K	P	K	Y	K	F	V	G	G	F	L	G	N	P	P
Template Known Secondary structure								S		S	B							S	B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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