Job Description P77268 Confidence 100.00% Date Thu Jan 5 12:27:01 GMT 2012 Rank 51 Aligned Residues 214 % Identity 23% Template c2ghiD_ PDB info PDB header:transport protein Chain: D: PDB Molecule:transport protein; PDBTitle: crystal structure of plasmodium yoelii multidrug resistance2 protein 2 Resolution 2.20 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	I	Q	Q	L	H	L	S	F	P	G	F	N	G	D	V	H	A	L	N	N	V	S	L	Q	I	N	R	G	E	I	V	G	L	V	G	E	S	G	S	G	K	S	V	T	A	M	L	I	M	R	L	L	P	T	G	S	Y	C	V	H	R	G	Q	I	S	L	L	G	E	D	V	L	N	A	R	E	K	Q
Query Conservation
Alig confidence														.	.	.	.	.	.																																							.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.																																							.	.	.	.	.	.
Template Sequence		I	E	F	S	D	V	N	F	S	Y	H	R	.	.	.	.	.	.	T	L	K	S	I	N	F	F	I	P	S	G	T	T	C	A	L	V	G	H	T	G	S	G	K	S	T	I	A	K	L	L	Y	R	F	Y	D	A	.	.	.	.	.	.	E	G	D	I	K	I	G	G	K	N	V	N	K	Y	N	R	N	S
Template Known Secondary structure														.	.	.	.	.	.	S										T	T								S	T	T	S	S									T	T	S	S			.	.	.	.	.	.							T	T			G	G	G	S
Template Predicted Secondary structure														.	.	.	.	.	.																																							.	.	.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.							30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.							.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.			.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																																																																					.	.
Query SS confidence																																																																					.	.
Query Sequence		L	R	Q	W	R	G	A	R	V	A	M	I	F	Q	E	P	M	T	A	L	N	P	T	R	R	I	G	L	Q	M	M	D	V	I	R	H	H	Q	P	I	S	R	R	E	A	R	A	K	A	I	D	L	L	E	E	M	Q	I	P	D	A	V	E	V	M	S	R	.	.	Y	P	F	E	L	S	G	G	M	R	Q
Query Conservation																																																																					.	.
Alig confidence				.	.	.	.											.	.	.															.	.	.	.	.	.	.																												.	.
Template Conservation				.	.	.	.											.	.	.															.	.	.	.	.	.	.
Template Sequence		I	R	.	.	.	.	S	I	I	G	I	V	P	Q	D	T	.	.	.	I	L	F	N	E	T	I	K	Y	N	I	L	Y	G	.	.	.	.	.	.	.	K	L	D	A	T	D	E	E	V	I	K	A	T	K	S	A	Q	L	Y	D	F	I	E	A	L	P	K	K	W	D	T	I	V	L	S	G	G	E	R	Q
Template Known Secondary structure				.	.	.	.	T	T						S	S		.	.	.				S	S	B							T	T	.	.	.	.	.	.	.	S	T	T													T	T								S	T	T	G	G	G		B
Template Predicted Secondary structure				.	.	.	.											.	.	.															.	.	.	.	.	.	.
Template SS confidence
		91	.					.	.	.	.	.	.	.	100	.	.				.	.	.	.	.	.	.	110	.	.	.	.	.	.								.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	M	I	A	L	A	F	S	C	E	P	Q	L	I	I	A	D	E	P	T	T	A	L	D	V	T	V	Q	L	Q	V	L	R	L	L	K	H	K	A	R	A	S	G	T	A	V	L	F	I	S	H	D	M	A	V	V	S	Q	L	C	D	S	V	Y	V	M	Y	A	G	S	V	I	E	S	G	V	T	A	D
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.	.									.															.
Template Conservation																										.	.	.	.	.	.	.	.	.	.									.															.
Template Sequence		R	I	A	I	A	R	C	L	L	K	D	P	K	I	V	I	F	D	D	S	K	T	E	Y	.	.	.	.	.	.	.	.	.	.	L	F	Q	K	A	V	E	D	.	N	R	T	L	I	I	I	A	H	R	L	S	T	I	.	S	S	A	E	S	I	I	L	L	N	K	G	K	I	V	E	K	G	T	H	K	D
Template Known Secondary structure											T			S												.	.	.	.	.	.	.	.	.	.									.									S	S	G	G	G	S	.	T	T		S							T	T
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.									.															.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.											.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	H	H	P	R	H	P	Y	T	I	G	L	L	Q	C
Query Conservation
Alig confidence						.	.
Template Conservation						.	.
Template Sequence		L	L	K	L	.	.	N	G	E	Y	A	E	M	W	N	M
Template Known Secondary structure						.	.	T	S								T
Template Predicted Secondary structure						.	.
Template SS confidence
		240	.	.	.			.	.	.	.	.	.	250	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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