Job Description P0A9S3 Confidence 100.00% Date Thu Jan 5 11:11:11 GMT 2012 Rank 44 Aligned Residues 316 % Identity 16% Template c3jynA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:quinone oxidoreductase; PDBTitle: crystal structures of pseudomonas syringae pv. tomato dc30002 quinone oxidoreductase complexed with nadph Resolution 2.01 Å

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		1	.	.	.	.	.	.	.	.	10	.				.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure													.	.	.																																										.
Query SS confidence													.	.	.																																										.
Query Sequence		M	K	S	V	V	N	D	T	D	G	I	.	.	.	V	R	V	A	E	S	V	I	P	E	I	K	H	Q	D	E	V	R	V	K	I	A	S	S	G	L	C	G	S	D	L	P	R	I	F	K	N	G	A	H	Y	.	Y	P	I	T	L	G	H	E	F	S	G	Y	I	D	A	V	G	S	G	V	D	D	L	H
Query Conservation													.	.	.																																										.
Alig confidence													.	.	.											.																															.
Template Conservation																										.
Template Sequence		A	K	R	I	Q	F	S	T	V	G	G	P	E	V	L	E	Y	V	D	F	E	P	E	A	.	P	G	P	Q	A	V	V	V	R	N	K	A	I	G	L	N	F	I	D	T	Y	Y	R	S	G	L	Y	P	A	P	F	L	P	S	G	L	G	A	E	G	A	G	V	V	E	A	V	G	D	E	V	T	R	F	K
Template Known Secondary structure							B	S	S		S	S	G	G	G											.			T	T																					T	S	S			S	S	S	S	B															T	T			S
Template Predicted Secondary structure																										.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	D	A	V	A	C	V	P	L	L	P	C	F	T	C	P	E	C	L	K	G	F	Y	S	Q	C	A	K	Y	D	F	I	G	S	R	R	D	G	G	F	A	E	Y	I	V	V	K	R	K	N	V	F	A	L	P	T	D	M	P	I	E	D	G	A	F	I	E	P	I	T	V	G	L	H	A	F	H	L	A
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	G	D	R	V	A	Y	G	T	G	P	L	G	A	Y	S	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	V	L	P	E	A	N	L	V	K	L	A	D	S	V	S	F	E	Q	A	A	A	L	M	L	K	G	L	T	V	Q	Y	L	L	R	Q	T	Y
Template Known Secondary structure		T	T						S	S	S	S	S			S	B	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					G	G	G						T	T	S																					T	T	S
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.																									.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	G	C	E	N	K	N	V	I	I	I	G	A	G	T	I	G	L	L	A	I	Q	C	A	V	A	L	G	A	K	S	V	T	A	I	D	I	S	S	E	K	L	A	L	A	K	S	F	G	A	M	Q	T	F	N	S	S	E	M	S	A	P	Q	M	Q	S	V	L	R	E	L	R	F	N	Q	L	I	L	E	T
Query Conservation
Alig confidence																																																																										.
Template Conservation																																																																										.
Template Sequence		Q	V	K	P	G	E	I	I	L	F	H	A	A	A	G	G	V	G	S	L	A	C	Q	W	A	K	A	L	G	A	K	L	I	G	T	V	S	S	P	E	K	A	A	H	A	K	A	L	G	A	W	E	T	I	D	Y	S	H	E	D	V	A	K	R	V	L	E	L	T	D	G	K	.	K	C	P	V	V	Y	D
Template Known Secondary structure					T	T						S	S	T	T	S														T								S	S											T		S					T	T	T	S										T	T	T		.
Template Predicted Secondary structure																																																																										.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.					.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure																																																				.	.	.	.
Query SS confidence																																																				.	.	.	.
Query Sequence		A	G	V	P	Q	T	V	E	L	A	V	E	I	A	G	P	H	A	Q	L	A	L	V	G	T	L	H	Q	D	L	H	L	T	S	A	T	F	G	K	I	L	R	K	E	L	T	V	I	G	S	.	.	.	.	W	M	N	Y	S	S	P	W	P	G	Q	E	W	E	T	A	S	R	L	L	T	E	R	K	L	S
Query Conservation																																																				.	.	.	.
Alig confidence																														.	.																					.	.	.	.
Template Conservation																														.	.
Template Sequence		G	V	G	Q	D	T	W	L	T	S	L	D	S	V	A	P	R	G	L	V	V	S	F	G	N	A	S	G	.	.	P	V	S	G	V	N	L	G	I	L	A	Q	K	D	S	V	Y	V	T	R	P	T	L	G	S	Y	A	N	N	A	Q	N	L	Q	T	M	A	D	E	L	F	D	M	L	A	S	G	K	L	K
Template Known Secondary structure		S	S		G	G	G						T	T													T	T		.	.				S			T						T	T	S												S		S	T	T															T	T	S	S
Template Predicted Secondary structure																														.	.
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.			.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	P	L	I	A	H	R	G	S	F	E	S	F	A	Q	A	V	R	D	I	A	R	N	A	M	P	G	K	V	L	L	I	P
Query Conservation
Alig confidence				.	.
Template Conservation				.	.
Template Sequence		V	D	.	.	G	I	E	Q	Y	A	L	K	D	A	A	K	A	Q	I	E	L	S	A	R	R	T	T	G	S	T	I	L	I	P
Template Known Secondary structure				.	.							G	G	G										T	T				S
Template Predicted Secondary structure				.	.
Template SS confidence
		294	.			.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions