Job Description P0A9S3 Confidence 100.00% Date Thu Jan 5 11:11:11 GMT 2012 Rank 45 Aligned Residues 343 % Identity 14% Template c3iupB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:putative nadph:quinone oxidoreductase; PDBTitle: crystal structure of putative nadph:quinone oxidoreductase2 (yp_296108.1) from ralstonia eutropha jmp134 at 1.70 a resolution Resolution 1.70 Å

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		1	.	.	.	.	.	.		.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure									.																																												.
Query SS confidence									.																																												.
Query Sequence		M	K	S	V	V	N	D	.	T	D	G	I	V	R	V	A	E	S	V	I	P	E	I	K	H	Q	D	E	V	R	V	K	I	A	S	S	G	L	C	G	S	D	L	P	R	I	F	K	N	G	A	.	H	Y	Y	P	I	T	L	G	H	E	F	S	G	Y	I	D	A	V	G	S	G	V	D	D	L	H	P	G
Query Conservation									.																																												.
Alig confidence									.															.																													.
Template Conservation																								.
Template Sequence		L	R	S	R	I	K	S	S	G	E	L	E	L	S	L	D	S	I	D	T	P	H	.	P	G	P	D	E	V	L	I	R	I	E	A	S	P	L	N	P	S	D	L	G	L	L	F	G	A	A	D	X	S	T	A	K	A	S	G	T	A	E	R	P	I	V	T	A	R	V	P	E	G	A	X	R	S	X	A	G
Template Known Secondary structure								T	T	S														.			T	T																					T	T												S	S	S									G	G	G	G	G	G	G	G	G
Template Predicted Secondary structure																								.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.			.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.		.	150	.	.	.	.	.
Predicted Secondary structure																														.	.																																											.
Query SS confidence																														.	.																																											.
Query Sequence		D	A	V	A	C	V	P	L	L	P	C	F	T	C	P	E	C	L	K	G	F	Y	S	Q	C	A	K	Y	.	.	D	F	I	G	S	R	R	D	G	G	F	A	E	Y	I	V	V	K	R	K	N	V	F	A	L	P	T	D	M	P	I	E	D	G	A	F	I	E	P	I	T	V	.	G	L	H	A	F	H	L
Query Conservation																														.	.																																											.
Alig confidence																														.	.																																											.
Template Conservation
Template Sequence		R	L	D	A	S	X	P	V	G	N	E	G	A	G	V	V	V	E	A	G	S	S	P	A	A	Q	A	L	X	G	K	T	V	A	A	I	G	G	A	X	Y	S	Q	Y	R	C	I	P	A	D	Q	C	L	V	L	P	E	G	A	T	P	A	D	G	A	S	S	F	V	N	P	L	T	A	L	G	X	V	E	T
Template Known Secondary structure		G	T	T							S											S	S					T	T	T	T								S			S	B	S						G	G	G						T	T							T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	G	C	E	N	K	N	V	I	I	I	G	A	G	T	I	G	L	L	A	I	Q	C	A	V	A	L	G	A	K	S	V	T	A	I	D	I	S	S	E	K	L	A	L	A	K	S	F	G	A	M	Q	T	F	N	S	S	E	M	S	A	P	Q	M	Q	S	V	L	R	E	L	R	F	N	Q	L	I	L	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		X	R	L	E	G	H	S	A	L	V	H	T	A	A	A	S	N	L	G	Q	X	L	N	Q	I	C	L	K	D	G	I	K	L	V	N	I	V	R	K	Q	E	Q	A	D	L	L	K	A	Q	G	A	V	H	V	C	N	A	A	S	P	T	F	X	Q	D	L	T	E	A	L	V	S	T	G	A	T	I	A	F	D
Template Known Secondary structure					T	T		S					S	S	T	T	S														T								S	S										T	T		S					T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.																	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	A	G	V	P	Q	T	V	E	L	A	V	E	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	P	H	A	Q	L	A	L	V	G	T	L	H	Q	D	L	H	L	T	S	A	T	F	G	K	I	L	R	K	E	L	T	V	I	G	S	W	M	N	Y	S	S	P	W	P	G	Q	E	W
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	T	G	G	G	K	L	G	G	Q	I	L	T	C	X	E	A	A	L	N	K	S	A	R	E	Y	S	R	Y	G	S	T	T	H	K	Q	V	Y	L	Y	G	G	L	D	T	S	P	T	E	F	N	R	N	F	G	X	A	W	G	X	G	G	W	L	L	F	P	F	L	Q	K	I	G	R	E	R	A	N	A	L
Template Known Secondary structure		S					S																T			S			T	T			S	S										S											S		S
Template Predicted Secondary structure
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.			.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure																													.	.
Query SS confidence																													.	.
Query Sequence		E	T	A	S	R	L	L	T	E	R	K	L	S	L	E	P	L	I	A	H	R	G	S	F	E	S	F	.	.	A	Q	A	V	R	D	I	A	R	N	A	M	P	G	K	V	L	L	I	P
Query Conservation																													.	.
Alig confidence																	.	.											.	.
Template Conservation																	.	.
Template Sequence		K	Q	R	V	V	A	E	L	K	T	T	F	A	S	H	.	.	Y	S	K	E	I	S	L	A	E	V	L	D	L	D	X	I	A	V	Y	N	K	R	A	T	G	E	K	Y	L	I	N	P
Template Known Secondary structure								T	T	T	T	T	T				.	.		S									T									T	T			T	T							T
Template Predicted Secondary structure																	.	.
Template SS confidence
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340			.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions