Job Description P0A9S3 Confidence 100.00% Date Thu Jan 5 11:11:11 GMT 2012 Rank 54 Aligned Residues 291 % Identity 18% Template c3gohA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:alcohol dehydrogenase, zinc-containing; PDBTitle: crystal structure of alcohol dehydrogenase superfamily protein2 (np_718042.1) from shewanella oneidensis at 1.55 a resolution Resolution 1.55 Å

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		1	.	.	.	.	.	.	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure													.																																										.
Query SS confidence													.																																										.
Query Sequence		M	K	S	V	V	N	D	T	D	G	I	.	V	R	V	A	E	S	V	I	P	E	I	K	H	Q	D	E	V	R	V	K	I	A	S	S	G	L	C	G	S	D	L	P	R	I	F	K	N	G	A	H	Y	.	Y	P	I	T	L	G	H	E	F	S	G	Y	I	D	A	V	G	S	G	V	D	D	L	H	P	G
Query Conservation													.																																										.
Alig confidence													.											.																															.
Template Conservation																								.
Template Sequence		H	Q	V	W	A	Y	Q	T	K	T	H	S	V	T	L	N	S	V	D	I	P	A	.	L	A	A	D	D	I	L	V	Q	N	Q	A	I	G	I	N	P	V	D	W	K	F	I	K	A	N	P	I	N	W	S	N	G	H	V	P	G	V	D	G	A	G	V	I	V	K	V	G	A	K	V	D	S	K	X	L	G
Template Known Secondary structure									T	T	T	T												.			T	T																							T	T				T	T					S											T	T	S		G	G	G	T	T
Template Predicted Secondary structure																								.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	V	A	C	V	P	L	L	P	C	F	T	C	P	E	C	L	K	G	F	Y	S	Q	C	A	K	Y	D	F	I	G	S	R	R	D	G	G	F	A	E	Y	I	V	V	K	R	K	N	V	F	A	L	P	T	D	M	P	I	E	D	G	A	F	I	E	P	I	T	V	G	L	H	A	F	H	L	A	Q	G
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	R	V	A	Y	H	T	S	L	K	R	H	G	S	F	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	F	T	V	L	N	T	D	R	V	X	T	L	P	D	N	L	S	F	E	R	A	A	A	L	P	C	P	L	L	T	A	W	Q	A	F	E	K	I	P
Template Known Secondary structure										T	T	S			S	S	B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S						T	T	S						T	T	S							T	S												T	T	S
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.																									.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	E	N	K	N	V	I	I	I	G	A	G	T	I	G	L	L	A	I	Q	C	A	V	A	L	G	A	K	S	V	T	A	I	D	I	S	S	E	K	L	A	L	A	K	S	F	G	A	M	Q	T	F	N	S	S	E	M	S	A	P	Q	M	Q	S	V	L	R	E	L	R	F	N	Q	L	I	L	E	T	A	G
Query Conservation
Alig confidence																																				.																								.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.																								.	.	.	.	.	.	.	.	.	.
Template Sequence		L	T	K	Q	R	E	V	L	I	V	G	F	G	A	V	N	N	L	L	T	Q	X	L	N	N	A	G	Y	V	V	D	L	V	S	.	A	S	L	S	Q	A	L	A	A	K	R	G	V	R	H	L	Y	R	E	P	S	Q	V	.	.	.	.	.	.	.	.	.	.	T	Q	K	Y	F	A	I	F	D	A	A	L
Template Known Secondary structure				S										S														T								.	S	S										T						S	S	G	G	G		.	.	.	.	.	.	.	.	.	.		S									T	T
Template Predicted Secondary structure																																				.																								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.											.	.	.	.	200	.	.	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	Q	T	V	E	L	A	V	E	I	A	G	P	H	A	Q	L	A	L	V	G	T	L	H	Q	D	L	H	L	T	S	A	T	F	G	K	I	L	R	K	E	L	T	V	I	G	S	W	M	N	Y	S	S	P	W	P	G	Q	E	W	E	T	A	S	R	L	L	T	E	R	K	L	S	L	E	P	L	I	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.																										.	.
Template Conservation		.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.																										.	.
Template Sequence		.	.	.	.	.	.	.	.	V	P	S	L	K	A	N	G	H	I	I	C	I	Q	D	R	R	T	I	S	Y	H	E	I	A	L	G	A	L	H	D	F	G	D	R	.	.	.	.	.	.	.	.	Q	D	W	Q	I	L	X	Q	Q	G	E	A	L	L	T	L	I	A	Q	G	K	X	E	I	A	.	.	A	P
Template Known Secondary structure		.	.	.	.	.	.	.	.	G	G	G																S							G	G	G								.	.	.	.	.	.	.	.																			T	T	S	S				.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.																										.	.
Template SS confidence
										215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.									250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.			.	.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	R	G	S	F	E	S	F	A	Q	A	V	R	D	I	A	R	N	A	M	P	G	K	V	L	L	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	I	F	R	F	E	Q	X	I	E	A	L	D	H	S	E	Q	T	K	L	K	T	V	L	T	L	N
Template Known Secondary structure						G	G	G																			S
Template Predicted Secondary structure
Template SS confidence
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions