Job Description P0A9S3 Confidence 99.70% Date Thu Jan 5 11:11:11 GMT 2012 Rank 86 Aligned Residues 292 % Identity 14% Template c2vz8B_ PDB info PDB header:transferase Chain: B: PDB Molecule:fatty acid synthase; PDBTitle: crystal structure of mammalian fatty acid synthase Resolution 3.2 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																																																										.
Query SS confidence																																																										.
Query Sequence		V	I	P	E	I	K	H	Q	D	E	V	R	V	K	I	A	S	S	G	L	C	G	S	D	L	P	R	I	F	K	N	G	A	H	Y	Y	P	I	T	L	G	H	E	F	S	G	Y	I	D	A	V	G	S	G	V	D	.	D	L	H	P	G	D	A	V	A	C	V	P	L	L	P	C	F	T	C	P	E	C	L
Query Conservation																																																										.
Alig confidence																																						.	.	.																		.																.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.																																		.	.	.	.	.	.	.	.
Template Sequence		H	Y	A	L	P	A	S	C	Q	D	R	L	C	S	V	Y	Y	T	S	L	N	F	R	D	V	M	L	A	T	G	K	L	S	P	D	S	.	.	.	I	P	G	K	W	L	T	R	D	C	M	L	G	M	E	F	S	G	R	D	A	S	G	R	R	V	M	G	M	V	P	A	E	.	.	.	.	.	.	.	.
Template Known Secondary structure		G	G				T	T	S	T	T	T																			T	S	S		G	G	G	.	.	.			S			S		S	S												T	T									S	S		.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																						.	.	.																																		.	.	.	.	.	.	.	.
Template SS confidence
		1552	.	.	.	.	.	.	.	1560	.	.	.	.	.	.	.	.	.	1570	.	.	.	.	.	.	.	.	.	1580	.	.	.	.	.	.	.				.	.	1590	.	.	.	.	.	.	.	.	.	1600	.	.	.	.	.	.	.	.	.	1610	.	.	.	.	.	.	.	.	.	1620
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.			.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																																																										.	.
Query SS confidence																																																										.	.
Query Sequence		K	G	F	Y	S	Q	C	A	K	Y	D	F	I	G	S	R	R	D	G	G	F	A	E	Y	I	V	V	K	R	K	N	V	F	A	L	P	T	D	M	P	I	E	D	G	A	F	I	E	P	I	T	V	G	L	H	A	.	.	F	H	L	A	Q	G	C	E	N	K	N	V	I	I	I	G	A	G	T	I	G	L
Query Conservation																																																										.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	A	T	S	V	L	L	L	Q	H	A	T	W	E	V	P	S	T	W	T	L	E	E	A	A	S	V	P	I	V	Y	T	T	A	Y	Y	S	L	V	V	R	G	R	M	Q	P	G	E	S	V	L	I	H	S	G	S	G	G	V	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	B	S						G	G	G						T	T	S						T	T													T	T	T	T				T	T								S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																					1621	.	.	.	.	.	.	.	.	1630	.	.	.	.	.	.	.	.	.	1640	.	.	.	.	.	.	.	.	.	1650	.	.	.	.	.	.	.	.	.	1660	.	.	.	.	.	.	.	.	.	1670	.	.	.	.	.	.	.	.	.	1680	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.					.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure																															.	.	.	.
Query SS confidence																															.	.	.	.
Query Sequence		L	A	I	Q	C	A	V	A	L	G	A	K	S	V	T	A	I	D	I	S	S	E	K	L	A	L	A	K	S	.	.	.	.	F	G	A	M	Q	T	F	N	S	S	E	M	S	A	P	Q	M	Q	S	V	L	R	E	L	R	F	N	Q	L	I	L	E	T	A	G	V	P	Q	T	V	E	L	A	V	E	I	A
Query Conservation																															.	.	.	.
Alig confidence																															.	.	.	.																																		.
Template Conservation																																																																				.
Template Sequence		Q	A	A	I	A	I	A	L	S	R	G	C	R	V	F	T	T	V	G	S	A	E	K	R	A	Y	L	Q	A	R	F	P	Q	L	D	E	T	C	F	A	N	S	R	D	T	S	F	E	Q	H	V	L	R	H	T	A	G	K	G	V	D	L	V	L	N	S	.	L	A	E	E	K	L	Q	A	S	V	R	C	L
Template Known Secondary structure											T	T								S													T	T			S	T	T				S	S	S	S									T	T	T	T										.											T	T
Template Predicted Secondary structure																																																																				.
Template SS confidence
		1682	.	.	.	.	.	.	.	1690	.	.	.	.	.	.	.	.	.	1700	.	.	.	.	.	.	.	.	.	1710	.	.	.	.	.	.	.	.	.	1720	.	.	.	.	.	.	.	.	.	1730	.	.	.	.	.	.	.	.	.	1740	.	.	.	.	.	.	.		.	.	1750	.	.	.	.	.	.	.	.	.	1760
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.					.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.
Query SS confidence																																							.	.	.	.
Query Sequence		G	P	H	A	Q	L	A	L	V	G	T	L	H	Q	D	L	H	L	T	S	A	T	F	G	K	I	L	R	K	E	L	T	V	I	G	S	W	.	.	.	.	M	N	Y	S	S	P	W	P	G	Q	E	W	E	T	A	S	R	L	L	T	E	R	K	L	S	L	E	P	L	I	A	H	R	G	S	F	E	S	F
Query Conservation																																							.	.	.	.
Alig confidence												.	.																										.	.	.	.																														.	.
Template Conservation												.	.																																																											.	.
Template Sequence		A	Q	H	G	R	F	L	E	I	G	.	.	K	F	D	L	S	N	N	H	A	L	G	M	A	V	F	L	K	N	V	T	F	H	G	I	L	L	D	S	L	F	E	E	G	G	A	T	W	Q	E	V	S	E	L	L	K	A	G	I	Q	E	G	V	V	Q	P	L	K	C	.	.	T	V	F	P	R	T	K	V
Template Known Secondary structure												.	.						T	T					T	T	G	G	G	G	T								T					T	S																	T	T	T		S						.	.					S	S	T
Template Predicted Secondary structure												.	.																																																											.	.
Template SS confidence
		1761	.	.	.	.	.	.	.	.	1770			.	.	.	.	.	.	.	.	.	1780	.	.	.	.	.	.	.	.	.	1790	.	.	.	.	.	.	.	.	.	1800	.	.	.	.	.	.	.	.	.	1810	.	.	.	.	.	.	.	.	.	1820	.	.	.	.	.	.	.	.			.	1830	.	.	.	.	.	.
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	A	V	R	D	I	A	R	N	A	M	P	G	K	V	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	A	A	F	R	Y	M	A	Q	G	K	H	I	G	K	V	V	I
Template Known Secondary structure										T	T			S	S
Template Predicted Secondary structure
Template SS confidence
		1837	.	.	1840	.	.	.	.	.	.	.	.	.	1850	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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