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Job DescriptionP0A9S3
Confidence100.00%DateThu Jan 5 11:11:11 GMT 2012
Rank2Aligned Residues340
% Identity21%Templatec2dphA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:formaldehyde dismutase; PDBTitle: crystal structure of formaldehyde dismutase
Resolution2.27 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.. .......30.........40.........50.........60.........70.....
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Query Sequence  MKSVVNDTDGIVRVAESVIPEI. . . . . KHQDEVRVKIASSGLCGSDLPRIFKNGAHYYPITLGHEFSGYIDAVGSGVDDL
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Template Sequence  NKSVVYHGTRDLRVETVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYRGRFIVPKGHVLGHEITGEVVEKGSDVELM
Template Known Secondary structure  TT



STT
TT


TTSS


TT
B




TT

S
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   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   76...80.........90.........100..... ....110.........120.........130.........
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Query Sequence  HPGDAVACVPLLPCFTCPECLKGFYSQCAK. . . . . . . . . . . YDFIGSRRDGGFAEYIVVKRKNVFALPTDMPIED. . . . .
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Template Sequence  DIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPDADLGAFGFDLKGWSGGQAEYVLVPYADYMLLKFGDKEQAMEKIK
Template Known Secondary structure 
TT


SB


S
STT
GGG


TTT
SSSS

BTTTTBSS


SSBSSS

SST
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   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   140.........150.........160.........170.........180.........190.........200.........210.......
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Query Sequence  . . GAFIEPITVGLHAFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSA
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Template Sequence  DLTLISDILPTGFHGCVSAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFETIDLRNSAPL
Template Known Secondary structure  TTTTTTT

TT


ST
SS
TTT
TTSSS
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   163......170.........180.........190.........200.........210.........220.........230.........240..
 
   218.220.........230........ .240.........250.........260...... ...270...
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Query Sequence  PQMQSVLRELRFNQLILETAG. . . . . . . . . . . . . . VPQTVELAVEIAGPHAQLALVGTLHQDL. . . . . . . . . . HLTSATF
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Template Conservation               
 
 
  
                         
   
  
  
                       
Template Sequence  RDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGIYVGSDPDPVNKDAGSGRLHLDF
Template Known Secondary structure  SSS

S
TT
B
SGGGTTSB
TT

S


S

SS
SSTT




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   243......250.........260.........270.........280.........290.........300.........310.........320..
 
   274.....280.........290.........300.........310..... ....320.........330.........340......
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Query Sequence  GKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEP. . LIAHRGSFESFAQAVRDIARNAMPGKVLLIP
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Template Sequence  GKMWTKSIRIMTG. . . . . MAPVTNYNRHLTEAILWDQMPYLSKVMNIEVITLDQAPDGYAKFDKGS. PAKFVIDP
Template Known Secondary structure  TT

S.....S

GGGTTT



STTTT
.S

T
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   323......330..... ....340.........350.........360.........370.........380... ......390.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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