Job Description P0A9S3 Confidence 100.00% Date Thu Jan 5 11:11:11 GMT 2012 Rank 52 Aligned Residues 308 % Identity 14% Template c1xa0B_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:putative nadph dependent oxidoreductases; PDBTitle: crystal structure of mcsg target apc35536 from bacillus2 stearothermophilus Resolution 2.80 Å

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		1	.	.	.	.	.	.	.	.	10				.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure												.	.	.																																									.
Query SS confidence												.	.	.																																									.
Query Sequence		M	K	S	V	V	N	D	T	D	G	.	.	.	I	V	R	V	A	E	S	V	I	P	E	I	K	H	Q	D	E	V	R	V	K	I	A	S	S	G	L	C	G	S	D	L	P	R	I	F	K	N	G	A	.	H	Y	Y	P	I	T	L	G	H	E	F	S	G	Y	I	D	A	V	G	S	G	V	D	D	L	H
Query Conservation												.	.	.																																									.
Alig confidence												.	.	.												.																													.																		.	.	.	.	.
Template Conservation																										.																																															.	.	.	.	.
Template Sequence		F	Q	A	F	V	V	N	K	T	E	T	E	F	T	A	G	V	Q	T	I	S	X	D	D	.	L	P	E	G	D	V	L	V	R	V	H	Y	S	S	V	N	Y	K	D	G	L	A	S	I	P	D	G	K	I	V	K	T	P	F	V	P	G	I	D	L	A	G	V	V	V	S	.	.	.	.	.	S	Q	H	P
Template Known Secondary structure											S	S											G	G	G	.	S				S																	T	T	S	S	S	S	T	T					B				S									.	.	.	.	.		S
Template Predicted Secondary structure																										.																																															.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.						.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	D	A	V	A	C	V	P	L	L	P	C	F	T	C	P	E	C	L	K	G	F	Y	S	Q	C	A	K	Y	D	F	I	G	S	R	R	D	G	G	F	A	E	Y	I	V	V	K	R	K	N	V	F	A	L	P	T	D	M	P	I	E	D	G	A	F	I	E	P	I	T	V	G	L	H	A	F	H	L	A
Query Conservation
Alig confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	G	D	E	V	I	A	T	G	Y	E	I	G	V	T	H	F	G	G	Y	S	E	Y	A	R	L	H	G	E	W	L	V	P	L	P	K	G	L	T	L	K	E	A	X	A	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	A	G	F	T	A	A	L	S	I	H	R	L	E	E	H	G
Template Known Secondary structure										S	T	T	T	T	T	T	S			S	S	B	S						T	T	T						T	T										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																T	T	T
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.																	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	G	C	E	N	K	N	V	I	I	I	G	A	G	T	I	G	L	L	A	I	Q	C	A	V	A	L	G	A	K	S	V	T	A	I	D	I	S	S	E	K	L	A	L	A	K	S	F	G	A	M	Q	T	F	N	S	S	E	M	S	A	P	Q	M	Q	S	V	L	R	E	L	R	F	N	Q	L	I	L	E	T
Query Conservation
Alig confidence																																																														.	.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.	.
Template Sequence		L	T	P	E	R	G	P	V	L	V	T	G	A	T	G	G	V	G	S	L	A	V	S	X	L	A	K	R	G	Y	T	V	E	A	S	T	G	K	A	A	E	H	D	Y	L	R	V	L	G	A	K	E	V	L	A	E	R	I	R	P	.	.	.	.	.	.	.	.	.	L	D	K	Q	R	W	A	A	A	V	D
Template Known Secondary structure				G	G	G								T	T	S													T	T								S		G	G	G								T		S							S	S	S	.	.	.	.	.	.	.	.	.			S	S
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.										.	.	.	.	210	.	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.		.	.	.
Predicted Secondary structure																																																																														.
Query SS confidence																																																																														.
Query Sequence		A	G	V	P	Q	T	V	E	L	A	V	E	I	A	G	P	H	A	Q	L	A	L	V	G	T	L	H	Q	D	L	H	L	T	S	A	T	F	G	K	I	L	R	K	E	L	T	V	I	G	S	W	M	N	Y	S	S	P	W	P	G	Q	E	W	E	T	A	S	R	L	L	T	E	R	K	L	S	.	L	E	P
Query Conservation																																																																														.
Alig confidence																														.	.																											.	.	.	.																	.
Template Conservation																														.	.																											.	.	.	.
Template Sequence		P	V	G	G	R	T	L	A	T	V	L	S	R	X	R	Y	G	G	A	V	A	V	S	G	L	T	G	G	.	.	A	E	V	P	T	T	V	H	P	F	I	L	R	G	V	S	L	L	G	I	D	S	V	Y	C	P	.	.	.	.	X	D	L	R	L	R	I	W	E	R	L	A	G	D	L	K	P	D	L	E
Template Known Secondary structure			S	T	T	T	T					G	G	G											S			S	S	.	.	S						S							T								S	T	T			.	.	.	.												T	T	T	T
Template Predicted Secondary structure																														.	.																											.	.	.	.
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250			.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.					.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	A	H	R	G	S	F	E	S	F	A	Q	A	V	R	D	I	A	R	N	A	M	P	G	K	V	L	L	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	I	A	Q	E	I	S	L	A	E	L	P	Q	A	L	K	R	I	L	R	G	E	L	R	G	R	T	V	V	R
Template Known Secondary structure									G	G	G										T	T				S
Template Predicted Secondary structure
Template SS confidence
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions