Job Description P0A9S3 Confidence 100.00% Date Thu Jan 5 11:11:11 GMT 2012 Rank 4 Aligned Residues 339 % Identity 21% Template c1kolA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:formaldehyde dehydrogenase; PDBTitle: crystal structure of formaldehyde dehydrogenase Resolution 1.65 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.							.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.
Query Sequence		K	S	V	V	N	D	T	D	G	I	V	R	V	A	E	S	V	I	P	E	I	.	.	.	.	.	.	K	H	Q	D	E	V	R	V	K	I	A	S	S	G	L	C	G	S	D	L	P	R	I	F	K	N	G	A	H	Y	Y	P	I	T	L	G	H	E	F	S	G	Y	I	D	A	V	G	S	G	V	D	D	L
Query Conservation																							.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.
Template Conservation
Template Sequence		R	G	V	V	Y	L	G	S	G	K	V	E	V	Q	K	I	D	Y	P	K	M	Q	D	P	R	G	K	K	I	E	H	G	V	I	L	K	V	V	S	T	N	I	C	G	S	D	Q	H	M	V	R	G	R	T	T	A	Q	V	G	L	V	L	G	H	E	I	T	G	E	V	I	E	K	G	R	D	V	E	N	L
Template Known Secondary structure									T	T												S	B		T	T	S		B		S	S																				T	T		S				T	T		B														T	T			S
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.											.	.	.	.	.	.	.	.	120	.	.	.	.	.			.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.															.	.																.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.															.	.																.	.	.
Query Sequence		H	P	G	D	A	V	A	C	V	P	L	L	P	C	F	T	C	P	E	C	L	K	G	F	Y	S	Q	C	A	K	Y	D	F	I	G	S	.	.	.	.	.	.	.	.	.	.	R	R	D	G	G	F	A	E	Y	I	V	V	K	R	.	.	K	N	V	F	A	L	P	T	D	M	P	I	E	D	G	.	.	.
Query Conservation																																						.	.	.	.	.	.	.	.	.	.															.	.																.	.	.
Alig confidence																																						.	.	.	.	.	.	.	.	.	.															.	.																.	.	.
Template Conservation
Template Sequence		Q	I	G	D	L	V	S	V	P	F	N	V	A	C	G	R	C	R	S	C	K	E	M	H	T	G	V	C	L	T	V	N	P	A	R	A	G	G	A	Y	G	Y	V	D	M	G	D	W	T	G	G	Q	A	E	Y	V	L	V	P	Y	A	D	F	N	L	L	K	L	P	D	R	D	K	A	M	E	K	I	R	D
Template Known Secondary structure			T	T							S					S	S	S					T	T		G	G	G		S	S	S		S	S	S	S				B	T		T	T	S			B				S	B	S					S	S									S								T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
				141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	A	F	I	E	P	I	T	V	G	L	H	A	F	H	L	A	Q	G	C	E	N	K	N	V	I	I	I	G	A	G	T	I	G	L	L	A	I	Q	C	A	V	A	L	G	A	K	S	V	T	A	I	D	I	S	S	E	K	L	A	L	A	K	S	F	G	A	M	Q	T	F	N	S	S	E	M	S	A	P
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		L	T	C	L	S	D	I	L	P	T	G	Y	H	G	A	V	T	A	G	V	G	P	G	S	T	V	Y	V	A	G	A	G	P	V	G	L	A	A	A	A	S	A	R	L	L	G	A	A	V	V	I	V	G	D	L	N	P	A	R	L	A	H	A	K	A	Q	G	F	E	I	A	D	L	S	L	D	T	P	L	H
Template Known Secondary structure			G	G	G	G	T												T	T			T	T									S													T	T		S							S											T	T						T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.																240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.											.	270	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	M	Q	S	V	L	R	E	L	R	F	N	Q	L	I	L	E	T	A	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	Q	T	V	E	L	A	V	E	I	A	G	P	H	A	Q	L	A	L	V	G	T	L	H	Q	D	L	H	L	.	.	.	.	.	.	.	.	.	.	T	S	A	T	F
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	Q	I	A	A	L	L	G	E	P	E	V	D	C	A	V	D	A	V	G	F	E	A	R	G	H	G	H	E	G	A	K	H	E	A	P	A	T	V	L	N	S	L	M	Q	V	T	R	V	A	G	K	I	G	I	P	G	L	Y	V	T	E	D	P	G	A	V	D	A	A	A	K	I	G	S	L	S	I	R	F
Template Known Secondary structure									S	S	S											T	T		B		S	S	T	T	G	G	G	S	B		T	T																				S				S			T	T		S	S					T	T
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.		.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure																																														.
Query SS confidence																																														.
Query Sequence		G	K	I	L	R	K	E	L	T	V	I	G	S	W	M	N	Y	S	S	P	W	P	G	Q	E	W	E	T	A	S	R	L	L	T	E	R	K	L	S	L	E	P	L	I	.	A	H	R	G	S	F	E	S	F	A	Q	A	V	R	D	I	A	R	N	A	M	P	G	K	V	L	L	I	P
Query Conservation																																														.
Alig confidence														.	.	.	.	.																												.																					.
Template Conservation														.	.	.	.	.																																																	.
Template Sequence		G	L	G	W	A	K	S	H	S	F	H	T	.	.	.	.	.	G	Q	T	P	V	M	K	Y	N	R	A	L	M	Q	A	I	M	W	D	R	I	N	I	A	E	V	V	G	V	Q	V	I	S	L	D	D	A	P	R	G	Y	G	E	F	D	A	G	V	.	P	K	K	F	V	I	D	P
Template Known Secondary structure							T	T						.	.	.	.	.	S	S																T	T	S								T						G	G	G											T		.	S							T
Template Predicted Secondary structure														.	.	.	.	.																																																	.
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.						.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.		.	.	.	.	.	.	390	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions