Job Description P0A9V5 Confidence 95.81% Date Thu Jan 5 11:11:29 GMT 2012 Rank 59 Aligned Residues 51 % Identity 20% Template c3l1pA_ PDB info PDB header:transcription/dna Chain: A: PDB Molecule:pou domain, class 5, transcription factor 1; PDBTitle: pou protein:dna complex Resolution 2.80 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.							.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.
Query Sequence		E	L	L	S	S	L	E	Q	I	V	F	K	D	E	T	Q	K	I	T	L	T	H	R	T	T	S	C	T	E	I	E	Q	L	R	K	G	T	G	L	K	I	D	D	F	A	R	V	L	G	.	.	.	.	.	.	V	S	V	A	M	V	K	E	W	E	S	R	R	V	K	P
Query Conservation																																																			.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	M	K	A	L	Q	K	E	L	E	Q	F	A	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	K	Q	K	R	I	T	L	G	Y	T	Q	A	D	V	G	L	T	L	G	V	L	F	G	K	V	F	S	Q	T	T	I	S	R	F	E	A	L	Q	L	S	L
Template Known Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T															S													T	T		S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.															.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions