Job Description P0A9V5 Confidence 99.57% Date Thu Jan 5 11:11:29 GMT 2012 Rank 4 Aligned Residues 82 % Identity 17% Template c3gn5B_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:hth-type transcriptional regulator mqsa (ygit/b3021); PDBTitle: structure of the e. coli protein mqsa (ygit/b3021) Resolution 2.15 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	M	H	E	L	L	S	S	L	E	Q	I	V	F	K	D	E	T	Q	K	I	T	L	T	H	R	T	T	S	C	T	E	I	E	Q	L	R	K	G	T	G	L	K	I	D	D	F	A	R	V	L	G	V	S	V	A	M	V	K	E	W	E	S	R	R	V	K	P	S	S	A	E	L	K	L	M	R	L	I
Query Conservation
Alig confidence																					.	.	.	.	.	.	.																																										.
Template Conservation																					.	.	.	.	.	.	.																																										.
Template Sequence		E	E	S	D	A	F	M	A	Q	V	K	A	F	R	A	S	V	N	A	.	.	.	.	.	.	.	E	T	V	A	P	E	F	I	V	K	V	R	K	K	L	S	L	T	Q	K	E	A	S	E	I	F	G	G	G	V	N	A	F	S	R	Y	E	K	G	N	A	.	P	H	P	S	T	I	K	L	L	R	V	L
Template Known Secondary structure																					.	.	.	.	.	.	.	T	S													T	T												S		T	T								T			.
Template Predicted Secondary structure																					.	.	.	.	.	.	.																																										.
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.								.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	N	P	A	L	S	K	Q	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	K	H	P	E	L	L	N	E	I
Template Known Secondary structure					G	G	G
Template Predicted Secondary structure
Template SS confidence
		121	.	.	.	.	.	.	.	.	130

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions