Job Description P0A9V5 Confidence 87.90% Date Thu Jan 5 11:11:29 GMT 2012 Rank 111 Aligned Residues 39 % Identity 23% Template c2xsdC_ PDB info PDB header:transcription/dna Chain: C: PDB Molecule:pou domain, class 3, transcription factor 1; PDBTitle: crystal structure of the dimeric oct-6 (pou3f1) pou domain2 bound to palindromic more dna Resolution 2.05 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.							.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.
Query Sequence		C	T	E	I	E	Q	L	R	K	G	T	G	L	K	I	D	D	F	A	R	V	L	G	V	.	.	.	.	.	.	S	V	A	M	V	K	E	W	E	S	R	R	V	K	P
Query Conservation																										.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.
Template Conservation
Template Sequence		A	K	Q	F	K	Q	R	R	I	K	L	G	F	T	Q	A	D	V	G	L	A	L	G	T	L	Y	G	N	V	F	S	Q	T	T	I	C	R	F	E	A	L	Q	L	S	F
Template Known Secondary structure												T	T															S													T	T		S	B
Template Predicted Secondary structure
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions