Job Description P61949 Confidence 99.01% Date Thu Jan 5 12:07:27 GMT 2012 Rank 50 Aligned Residues 139 % Identity 16% Template c3lcmB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:putative oxidoreductase; PDBTitle: crystal structure of smu.1420 from streptococcus mutans ua159 Resolution 1.80 Å

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		2	.	.	.	.	.	.	.	10			.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40																												.	.	.	.	.	.	.	.	.	50	.	.
Predicted Secondary structure											.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	I	T	G	I	F	F	G	S	.	.	D	T	G	N	T	E	N	I	A	K	M	I	Q	K	Q	L	G	K	D	V	A	D	V	H	D	I	A	K	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	E	D	L	E	A	Y	D	I	L	L	L
Query Conservation											.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.																		.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.
Template Sequence		M	K	I	L	I	V	Y	T	H	P	N	P	T	S	F	N	A	E	I	L	K	Q	V	Q	T	N	L	S	.	K	E	H	T	V	S	T	L	D	L	Y	A	E	H	F	D	P	V	L	Q	F	N	E	T	H	K	R	R	D	L	A	K	V	A	E	M	E	K	Y	R	D	L	V	T	W	A	D	H	L	I	F
Template Known Secondary structure											S		T	T	S													S		.	T	T	S							T	T	T	T	T								S	S	S	S		G	G	G	G	G	G		G	G	G											S
Template Predicted Secondary structure																														.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.														.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.			.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.
Query Sequence		G	I	P	T	W	Y	Y	G	E	A	Q	C	D	W	D	D	F	F	P	T	L	E	E	I	.	.	.	.	.	.	.	.	.	.	.	.	.	D	F	N	G	K	L	V	A	L	F	G	C	G	D	Q	E	D	Y	A	E	Y	F	C	D	A	L	G	T	.	.	I	R	D	I	I	E	P	R	G	A	T	I	V
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.
Alig confidence							.																			.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.
Template Conservation							.
Template Sequence		I	F	P	I	W	.	W	S	G	M	P	A	I	L	K	G	F	I	D	R	V	F	V	A	D	F	A	Y	S	Y	K	K	V	G	L	E	G	H	L	Q	G	K	S	A	W	I	I	T	T	H	N	T	P	S	F	A	M	P	F	V	Q	D	Y	G	K	V	L	K	K	Q	I	L	K	P	C	A	I	S	P	V
Template Known Secondary structure						B	.	T	T	B													S		B	T	T	T					S	S	S						T	T										S	S		G	G	G	G	G	G	S	S		T	T							T	T	T	T	T	T
Template Predicted Secondary structure							.
Template SS confidence
		80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	H	W	P	T	A	G	Y	H	F	E	A	S	K	G	L	A	D	D	D	H	F	V	G	L	A	I	D	E	D	R	Q	P	E	L	T	A	E	R	V	E	K	W	V	K	Q	I	S	E
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	L	T	S	I	E	K	I	S	D	D	E	R	Q	K	L	L	H	K	V	A	Q
Template Known Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S	T	T	T	S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		159	160	.																									.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions