Job Description P61949 Confidence 99.86% Date Thu Jan 5 12:07:27 GMT 2012 Rank 23 Aligned Residues 129 % Identity 21% Template c3klbA_ PDB info PDB header:flavoprotein Chain: A: PDB Molecule:putative flavoprotein; PDBTitle: crystal structure of putative flavoprotein in complex with fmn2 (yp_213683.1) from bacteroides fragilis nctc 9343 at 1.75 a3 resolution Resolution 1.75 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.																														.	.	.	.	.	.	.	50	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	A	I	T	G	I	F	F	G	S	D	T	G	N	T	E	N	I	A	K	M	I	Q	K	Q	L	G	K	D	V	A	D	V	H	D	I	A	K	S	S	K	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	E	A	Y	D	I	L	L
Query Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	R	K	I	L	V	A	Y	F	S	C	S	G	V	T	K	A	V	A	E	K	L	A	A	I	T	G	A	D	L	Y	E	I	K	P	E	V	P	Y	T	E	A	D	L	D	W	N	D	K	K	S	R	S	S	V	E	X	R	D	A	L	S	R	P	A	I	S	G	T	L	F	H	P	E	K	Y	E	V	L	F
Template Known Secondary structure		G	S									S	S	S														T								B	S	S				T	G	G	G		T	T		T	T	S							T		T	T					B	S				S		G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	I	P	T	W	Y	Y	G	E	A	Q	C	D	W	D	D	F	F	P	T	L	E	E	I	D	F	N	G	K	L	V	A	L	F	G	C	G	D	Q	E	D	Y	A	E	Y	F	C	D	A	L	G	T	I	R	D	I	I	E	P	R	G	A	T	I	V	G	H	W	P	T	A	G	Y	H	F	E	A	S	K
Query Conservation
Alig confidence								.																.	.	.																		.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.																.	.	.																		.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	G	F	P	V	W	.	W	Y	I	A	P	T	I	I	N	T	F	L	E	S	Y	.	.	.	D	F	A	G	K	I	V	V	P	F	A	T	S	G	G	S	G	.	.	.	.	I	G	N	C	E	K	N	L	H	K	A	Y	P	D	I	V	W	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							B	.	T	T	B											T	S	.	.	.			T	T										S	S			.	.	.	.	S												T	T	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure								.																.	.	.																		.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.				.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120					.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	A	D	D	D	H	F	V	G	L	A	I	D	E	D	R	Q	P	E	L	T	A	E	R	V	E	K	W	V	K	Q	I	S
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.										.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.										.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	D	G	K	L	L	N	G	Q	I	.	.	.	.	T	R	D	L	V	T	E	W	F	E	K	I	R
Template Known Secondary structure		.	.	.	.	.	.	.	.							S			.	.	.	.												T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.										.	.	.	.
Template SS confidence
										139	140	.	.	.	.	.	.	.					.	.	150	.	.	.	.	.	.	.	.	.	160

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions