 |
Job Description | P61949 | Confidence | 28.55% | Date | Thu Jan 5 12:07:27 GMT 2012 |
Rank | 131 | Aligned Residues | 39 |
% Identity | 15% | Template | c3fozB_ |
PDB info |
PDB header:transferase/rna | Chain: B: PDB Molecule:trna delta(2)-isopentenylpyrophosphate transferase; |
PDBTitle: structure of e. coli isopentenyl-trna transferase in complex with e.2 coli trna(phe)
|
Resolution | 2.50 Å |
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | |
. | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | A | I | T | G | I | F | F | G | S | D | T | G | N | T | E | . |
N | I | A | K | M | I | Q | K | Q | L | G | K | D | V | A | D | V | H | D | I | A | K | S | S |
Query Conservation |   |
|   |
|   |   |
|   |
|   |
|   |
|
|
|
|   | . |   |
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|   |
|   |
|
| . |
|
|
|
|
|
|   |
|
|
|   |
|
|   |   |   |   |
|
|
|
|
|
|
|
|   |
|
|
|
|
Template Sequence |   |
L | P | K | A | I | F | L | M | G | P | . |
T | A | S | G | K | T | A | L | A | I | E | L | R | K | I | L | P | V | E | L | I | S | V | D | S | A | L | I | Y | K |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |
|
| . | S | S | S |
|  |  |  |  |  |  |  |  | T | T | T | S |
|  |  |  |  |  |
|
| S | S | T | T | B | T |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
| . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
9 | 10 | . | . | . | . | . | . | . | . | |
. | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|