Job Description P61949 Confidence 99.69% Date Thu Jan 5 12:07:27 GMT 2012 Rank 40 Aligned Residues 163 % Identity 22% Template c3b6iB_ PDB info PDB header:flavoprotein Chain: B: PDB Molecule:flavoprotein wrba; PDBTitle: wrba from escherichia coli, native structure Resolution 1.66 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.																						.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	I	T	G	I	F	F	G	S	D	T	G	N	T	E	N	I	A	K	M	I	Q	K	Q	L	G	K	D	.	V	A	D	V	H	D	I	A	K	S	S	K	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	E	A	Y	D	I	L	L	L	G	I	P	T	W	Y	Y
Query Conservation																														.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Conservation																																																																																.
Template Sequence		A	K	V	L	V	L	Y	Y	S	M	Y	G	H	I	E	T	M	A	R	A	V	A	E	G	A	S	K	V	D	G	A	E	V	V	V	K	R	V	P	E	T	M	P	P	Q	L	F	E	K	A	G	G	K	T	Q	T	A	P	V	A	T	P	Q	E	L	A	D	Y	D	A	I	I	F	G	T	P	T	R	.	F
Template Known Secondary structure											S	S	S															T	S	T	T												S								T	T						S		B			S	G	G	G	G	G		S									B	.	T
Template Predicted Secondary structure																																																																																.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.		80
		60	.	.	.	.	.	.	.	.	.	70	.	.	.					.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.			.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure																.	.	.	.																																														.	.
Query SS confidence																.	.	.	.																																														.	.
Query Sequence		G	E	A	Q	C	D	W	D	D	F	F	P	T	L	.	.	.	.	E	E	I	D	F	N	G	K	L	V	A	L	F	G	C	G	D	Q	E	D	Y	A	E	Y	F	C	D	A	L	G	T	I	R	D	I	I	E	P	R	G	A	T	I	V	G	.	.	H	W	P	T	A	G	Y	H	F	E	A	S	K	G	L
Query Conservation																.	.	.	.																																														.	.
Alig confidence																.	.	.	.																									.	.	.																			.	.
Template Conservation																																												.	.	.
Template Sequence		G	N	M	S	G	Q	M	R	T	F	L	D	Q	T	G	G	L	W	A	S	G	A	L	Y	G	K	L	A	S	V	F	S	S	T	G	T	G	G	G	Q	E	Q	.	.	.	T	I	T	S	T	W	T	T	L	A	H	H	G	M	V	I	V	P	I	G	Y	A	A	Q	E	L	F	D	V	S	Q	V	R	G	G
Template Known Secondary structure		T	B										T	T							T	T	T	T	T	T										S	S	S	T	T				.	.	.												T	T							T	T		S	G	G	G	G			S	S
Template Predicted Secondary structure																																												.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.				.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.					.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.
Query SS confidence																							.	.	.	.
Query Sequence		A	D	D	D	H	F	V	G	L	A	I	D	E	D	R	Q	P	E	L	T	A	.	.	.	.	E	R	V	E	K	W	V	K	Q	I	S	E	E	L
Query Conservation																							.	.	.	.
Alig confidence																							.	.	.	.
Template Conservation
Template Sequence		T	P	Y	G	A	T	T	I	A	G	G	D	G	S	R	Q	P	S	Q	E	E	L	S	I	A	R	Y	Q	G	E	Y	V	A	G	L	A	V	K	L
Template Known Secondary structure		B	T	T	B							T	T	S
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions