Job Description P61949 Confidence 98.72% Date Thu Jan 5 12:07:27 GMT 2012 Rank 62 Aligned Residues 147 % Identity 17% Template c2vzhA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nadh-dependent fmn reductase; PDBTitle: structures of nadh:fmn oxidoreductase (emob)-fmn complex Resolution 2.5 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.			.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.																				.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Predicted Secondary structure												.	.																		.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.																		.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	T	G	I	F	F	G	S	D	T	.	.	G	N	T	E	N	I	A	K	M	I	Q	K	Q	L	G	K	D	.	V	A	D	V	H	D	I	A	K	S	S	K	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	E	A	Y	D	I	L	L	L	G	I	P	T	W	Y	Y	G
Query Conservation												.	.																		.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.																		.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Conservation																																																																															.
Template Sequence		S	I	V	A	I	S	G	S	P	S	R	N	S	T	T	A	K	L	A	E	Y	A	L	A	H	V	L	A	R	S	D	S	Q	G	R	H	I	H	V	I	D	L	D	P	K	A	L	L	R	G	D	L	S	N	A	K	L	K	E	A	V	D	A	T	C	N	A	D	G	L	I	V	A	T	P	I	Y	.	K	A
Template Known Secondary structure										S	S	S	S																T	T	S	S								G	G	G	S								T		T	T	S														S									B	.	T	T
Template Predicted Secondary structure																																																																															.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80		.	.
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.				.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.
Query SS confidence																																																											.	.	.
Query Sequence		E	A	Q	C	D	W	D	D	F	F	P	T	L	E	E	I	D	F	N	G	K	L	V	A	L	F	G	C	G	D	Q	E	D	Y	A	E	Y	F	C	D	A	L	G	T	I	R	D	I	I	E	P	R	G	A	T	I	V	.	.	.	G	H	W	P	T	A	G	Y	H	F	E	A	S	K	G	L	A	D	D	D
Query Conservation																																																											.	.	.
Alig confidence																																			.	.	.																						.	.	.													.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.																																					.	.	.	.	.	.	.	.
Template Sequence		S	Y	T	G	L	L	K	A	F	L	D	I	L	P	Q	F	A	L	A	G	K	A	A	L	P	L	A	T	G	G	S	P	A	.	.	.	H	V	L	A	L	D	Y	G	L	R	P	V	L	H	S	M	G	V	R	H	V	V	Q	S	F	F	L	V	Q	S	Q	F	S	V	V	D	.	.	.	.	.	.	.	.
Template Known Secondary structure		B										T	T	S		T	T	T	T	B	T										S	S	G	G	.	.	.	G	G	G													T	T	B	S										S	T	T			S	S	S	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																			.	.	.																																					.	.	.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.				.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	F	V	G	L	A	I	D	E	D	R	Q	P	E	L	T	A	E	R	V	E	K	W	V	K	Q	I	S	E	E	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	G	K	L	A	V	E	D	D	V	A	S	Q	L	N	N	A	I	D	H	F	R	L	S	L
Template Known Secondary structure		.	.	.	.	.	.	.	S	S	S	S	S																		T
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions