Return to main results Retrieve Phyre Job Id

Job DescriptionP61949
Confidence99.75%DateThu Jan 5 12:07:27 GMT 2012
Rank36Aligned Residues139
% Identity19%Templatec2ohiB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:type a flavoprotein fpra; PDBTitle: crystal structure of coenzyme f420h2 oxidase (fpra), a diiron2 flavoprotein, reduced state
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.. .......50.........60.........70....
Predicted Secondary structure 
















......










Query SS confidence 









































. . . . . .































Query Sequence  MAITGIFFGSDTGNTENIAKMIQKQLGKDVADVHDIAKSSKE. . . . . . DLEAYDILLLGIPTWYYGEAQCDWDDFFPTLE
Query Conservation 
 
  
 
 
 



  

  
   
      
         ......     
 

    
   
  
     
   
 
Alig confidence 









































......














.















Template Conservation     
 


 
  


  

  
   
   
  
 
              
   
 







.        
  

 
 
Template Sequence  DERVTVIYDTMHGSTRKMAHAIAEGAMSEGVDVRVYCLHEDDRSEIVKDILESGAIALGAPTI. YDEPYPSVGDLLMYLR
Template Known Secondary structure 
S

SSSTT
TTTS
T
S

.TT
T
Template Predicted Secondary structure 























.




Template SS confidence 















































































   256...260.........270.........280.........290.........300.........310........ .320.........330....
 
   75 ....80.........90.........100.........110.........120.........130.........140.........150.
Predicted Secondary structure  ...






































Query SS confidence 
. . .











































































Query Sequence  E. . . IDFNGKLVALFGCGDQEDYAEYFCDALGTIRDIIEPRGATIVGHWPTAGYHFEASKGLADDDHFVGLAIDEDRQPE
Query Conservation   ...     
   


 
        
  
   
   
   
   

     
                

  
      
Alig confidence 
...














......


























.....................






Template Conservation          

   

 
 
......    
   
   
   
  

      .....................  
  
 
Template Sequence  GLKFNRTLTRKALVFGSMG. . . . . . GNGGATGTMKELLAEAGFDVACEEEVY. . . . . . . . . . . . . . . . . . . . . YVPTGDE
Template Known Secondary structure 
GGGT

S......SS

TT.....................SS

Template Predicted Secondary structure 











......




.....................

Template SS confidence 















































































   335....340.........350... ......360.........370.........380 .......
 
   152.......160.........
Predicted Secondary structure 

Query SS confidence 

















Query Sequence  LTAERVEKWVKQISEELH
Query Conservation       
  

  
   
 
Alig confidence 
..














Template Conservation 
..    
 
  

  

Template Sequence  L. . DACFEAGRKLAAEIR
Template Known Secondary structure  ..
Template Predicted Secondary structure  ..

Template SS confidence 

















   388 .390.........400...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions