Return to main results Retrieve Phyre Job Id

Job DescriptionP05052
Confidence60.64%DateThu Jan 5 10:58:39 GMT 2012
Rank325Aligned Residues56
% Identity23%Templated3deua1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   156...160.........170.........180.........190.........200.........210......
Predicted Secondary structure 















Query SS confidence 




























































Query Sequence  KDIAELIYTSESLIKKRLRDEGTSFTEILRDTRMRYAKKLITSNSYSINVVAQKCGYNSTS
Query Conservation    

     
   
 
 

  
 
   

   

  
  

     

 


   

   
Alig confidence 




































.....


















Template Conservation    
              
   


     

  
   .....    
   

  
      
Template Sequence  SDLARLVRIWRALIDHRLKPLELTQTHWVTLHNIHQL. . . . . PPDQSQIQLAKAIGIEQPS
Template Known Secondary structure  TTTTT

S.....
SSTS
Template Predicted Secondary structure 




.....







Template SS confidence 




























































   8.10.........20.........30.........40.... .....50.........60...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions