 |
Job Description | P05052 | Confidence | 66.47% | Date | Thu Jan 5 10:58:39 GMT 2012 |
Rank | 282 | Aligned Residues | 52 |
% Identity | 19% | Template | d2fxaa1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| MarR-like transcriptional regulators
|
Resolution | 2.40 |
|
  |   |
166 | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | S | L | I | K | K | R | L | R | D | E | G | T | S | F | T | E | I | L | R | D | T | R | M | R | Y | A | K | K | L | I | T | S | N | S | Y | S | I | N | V | V | A | Q | K | C | G | Y | N | S | T | S | Y | F | I | C | A | F | K | D |
Query Conservation |   |
  |   |   |
|   |
|   |
|
|   |   |
|   |
|   |   |   |
|
|   |   |   |
|
|   |   |
|   |   |
|
|   |   |   |   |   |
|
|   |
|
|
|   |   |   |
|
|   |   |   |
|   |
|   |
|   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|   |   |   |   |
|
|   |   |
|   |   |
|
|   |   |
|   | . | . | . | . | . | . |   |   |   |   |   |
|   |   |
|
|
|   |   |
|   |
| . |   |   |
|
|
|
|   |   |
|   |   |
Template Sequence |   |
E | K | D | W | Q | Q | W | L | K | P | Y | D | L | N | I | N | E | H | H | I | L | W | I | A | Y | . |
. |
. |
. |
. |
. |
Q | L | N | G | A | S | I | S | E | I | A | K | F | G | V | X | . |
H | V | S | T | A | F | N | F | S | K | K |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | T | G | G | G | T |
|
|  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  | T | S |  |  |  |  |  |  |  |  |  | T | T |
| . |
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
| . |
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
32 | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | |
|
|
|
|
|
. | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | |
. | . | . | . | . | . | . | 80 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|