Return to main results Retrieve Phyre Job Id

Job DescriptionP05052
Confidence51.18%DateThu Jan 5 10:58:39 GMT 2012
Rank377Aligned Residues50
% Identity8%Templated2fbia1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   168.170.........180.........190.........200.........210.........220....
Predicted Secondary structure 












Query SS confidence 
























































Query Sequence  LIKKRLRDEGTSFTEILRDTRMRYAKKLITSNSYSINVVAQKCGYNSTSYFICAFKD
Query Conservation   
 
 

  
 
   

   

  
  

     

 


   

   
 
 
 


Alig confidence 






















......















.










Template Conservation       
   


  
  

  
 ......     
  


     .    

  
  
Template Sequence  FFRPSLNQHGLTEQQWRVIRILR. . . . . . QQGEMESYQLANQACI. LRPSMTGVLAR
Template Known Secondary structure  TTT

......
STT
.
Template Predicted Secondary structure 



......






.
Template SS confidence 
























































   22.......30.........40.... .....50.........60 .........70.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions