Return to main results Retrieve Phyre Job Id

Job DescriptionP05052
Confidence43.00%DateThu Jan 5 10:58:39 GMT 2012
Rank424Aligned Residues43
% Identity19%Templated2ev0a1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Iron-dependent repressor protein
Resolution1.65

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   131........140.........150.........160.........170.....
Predicted Secondary structure 












Query SS confidence 












































Query Sequence  LTNINTFTCKITGIISFNIERQWHLKDIAELIYTSESLIKKRLRD
Query Conservation            
   
        

  

     
   
 
 

 
Alig confidence 

















..
























Template Conservation 
 
 



  

 
    ..  
    

  
 

 



 



Template Sequence  TPSMEDYIEQIYMLIEEK. . GYARVSDIAEALAVHPSSVTKMVQK
Template Known Secondary structure 
..SS

T

Template Predicted Secondary structure 

..







Template SS confidence 












































   3......10.........20 .........30.........40.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions