Job Description P05052 Confidence 98.04% Date Thu Jan 5 10:58:39 GMT 2012 Rank 15 Aligned Residues 123 % Identity 11% Template d2arca_ SCOP info Double-stranded beta-helix Regulatory protein AraC Regulatory protein AraC Resolution 1.50

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.			.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.
Query SS confidence																																																	.	.
Query Sequence		M	D	Y	V	C	S	V	V	F	I	C	Q	S	F	D	L	I	I	N	R	R	V	I	S	F	K	K	N	S	L	F	I	V	S	D	K	I	R	R	E	L	P	V	C	P	S	K	.	.	L	R	I	V	D	I	D	K	K	T	C	L	S	F	F	I	D	V	N	N	E	L	P	G	K	F	T	L	D	K	N
Query Conservation																																																	.	.
Alig confidence																																																	.	.
Template Conservation
Template Sequence		M	K	G	Y	I	L	N	L	T	I	R	G	Q	G	V	V	K	N	Q	G	R	E	F	V	C	R	P	G	D	I	L	L	F	P	P	G	E	I	H	H	Y	G	R	H	P	E	A	R	E	W	Y	H	Q	W	V	Y	F	R	P	R	A	Y	W	H	E	W	L	N	W	P	S	I	F	A	N	T	G	F	F	R
Template Known Secondary structure			S	S																T	T							T	T							T	T									T	T	S	S													G	G	G	G	G	G								T	T
Template Predicted Secondary structure
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Y	I	A	E	E	E	P	P	L	S	L	V	F	S	L	F	E	G	I	K	I	A	D	S	H	S	L	W	L	K	E	R	L	C	I	S	L	L	A	M	F	K	K	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	D	E	A	H	Q	P	H	F	S	D	L	F	G	Q	I	I	N	A	G	Q	G	E	G	R	Y	S	E	L	L	A	I	N	L	L	E	Q	L	L	L	R	R	M	E	A
Template Known Secondary structure				T	T	T																			S	S	S
Template Predicted Secondary structure
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions