 |
Job Description | P05052 | Confidence | 32.18% | Date | Thu Jan 5 10:58:39 GMT 2012 |
Rank | 491 | Aligned Residues | 58 |
% Identity | 5% | Template | d1q06a_ |
SCOP info | Putative DNA-binding domain
| Putative DNA-binding domain
| DNA-binding N-terminal domain of transcription activators
|
Resolution | 2.07 |
|
 |
  |   |
153 | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | |
|
|
|
|
|
|
|
. | . | . | . | |
. | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  | . | . | . | . | . | . | . | . |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
W | H | L | K | D | I | A | E | L | I | Y | T | S | E | S | L | I | K | K | R | L | R | D | E | G | T | S | F | T | . |
. |
. |
. |
. |
. |
. |
. |
E | I | L | R | . |
D | T | R | M | R | Y | A | K | K | L | I | T | S | N | S | Y | S | I | N | V | V | A | Q | K | C |
Query Conservation |   |
  |
|
|   |   |
|
|   |   |   |   |   |
|   |   |   |
|   |
|   |
|
|   |   |
|   |
|   |   | . | . | . | . | . | . | . | . |   |
|
|   | . |   |   |
|
|   |   |
|   |   |
|
|   |   |   |   |   |
|
|   |
|
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |
|   |
|   |   |   |
|
|
|   |   |
|
|
|   |
|
|   |   |
|
|
|   |   |   |   |
|   |   |   |   |   |
|   |
|   |   |   |   |
|   |   |
|   |   |
|   |   |
|
|   |   |
|   |
|
|   |   |
|   |   |   |
|
Template Sequence |   |
M | N | I | S | D | V | A | K | I | T | G | L | T | S | K | A | I | R | F | Y | E | E | K | G | L | V | T | P | P | M | R | S | E | N | G | Y | R | T | Y | T | Q | Q | H | L | N | E | L | T | L | L | R | Q | A | R | Q | V | G | F | N | L | E | E | S | G | E | L | V |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  | T | T |
| S |
|
|
|  |  |
| T | T | S |
|  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|