Return to main results Retrieve Phyre Job Id

Job DescriptionP05052
Confidence55.00%DateThu Jan 5 10:58:39 GMT 2012
Rank358Aligned Residues47
% Identity15%Templated1jhfa1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain LexA repressor, N-terminal DNA-binding domain
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   128.130.........140.........150.........160.... .....170.....
Predicted Secondary structure 














.
Query SS confidence 




































.










Query Sequence  SFILTNINTFTCKITGIISFNIERQWHLKDIAELIYT. SESLIKKRLRD
Query Conservation               
   
        

  

     .
   
 
 

 
Alig confidence 



















.















.










Template Conservation 
 

 

  

 

      . 
  





    
  
  

  

  
Template Sequence  KALTARQQEVFDLIRDHISQ. TGMPPTRAEIAQRLGFRSPNAAEEHLKA
Template Known Secondary structure 



.SS


TT
SS
Template Predicted Secondary structure 



.










Template SS confidence 
















































   2.......10.........20. ........30.........40.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions