 |
Job Description | P05052 | Confidence | 79.15% | Date | Thu Jan 5 10:58:39 GMT 2012 |
Rank | 168 | Aligned Residues | 63 |
% Identity | 10% | Template | c3bddD_ |
PDB info |
PDB header:transcription | Chain: D: PDB Molecule:regulatory protein marr; |
PDBTitle: crystal structure of a putative multiple antibiotic-resistance2 repressor (ssu05_1136) from streptococcus suis 89/1591 at 2.20 a3 resolution
|
Resolution | 2.20 Å |
|
 |
  |   |
155 | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | |
. | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | K | D | I | A | E | L | I | Y | T | S | E | S | L | I | K | K | R | L | R | D | . |
E | G | T | S | F | T | E | I | L | R | D | T | R | M | R | Y | A | K | K | L | I | T | S | N | S | Y | S | I | N | V | V | A | Q | K | C | G | Y | N | S | T | S | Y | F | I | C | A | F | K | D |
Query Conservation |   |
|   |   |
|
|   |   |   |   |   |
|   |   |   |
|   |
|   |
|
|   | . |   |
|   |
|   |   |   |
|
|   |   |   |
|
|   |   |
|   |   |
|
|   |   |   |   |   |
|
|   |
|
|
|   |   |   |
|
|   |   |   |
|   |
|   |
|   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |
|   |   |
|
|   |   |
|   |   |   | . | . | . | . | . | . |   |   |   |
|   |   |
|
|
|   |   |   |   |   | . |   |   |   |
|
|
|   |   |
|   |   |
Template Sequence |   |
X | E | D | L | L | Y | R | L | K | V | A | D | E | T | I | S | N | L | F | E | K | Q | L | G | I | S | L | T | R | Y | S | I | L | Q | T | L | L | K | D | . |
. |
. |
. |
. |
. |
A | P | L | H | Q | L | A | L | Q | E | R | L | Q | I | . |
D | R | A | A | V | T | R | H | L | K | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |
| S |  |  |  |  |  |  |  |  |  |  | T |
| . |
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |
|
| . |
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | |
|
|
|
|
|
. | . | . | . | . | . | . | 50 | . | . | . | . | . | . | |
. | . | . | 60 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|